Related ArticlesNMR resonance assignments of RNase P protein from Thermotoga maritima.
Biomol NMR Assign. 2018 Feb 15;:
Authors: Zeng D, Brown BP, Voehler MW, Cai S, Reiter NJ
Abstract
Ribonuclase P (RNase P) is an essential metallo-endonuclease that catalyzes 5' precursor-tRNA (ptRNA) processing and exists as an RNA-based enzyme in bacteria, archaea, and eukaryotes. In bacteria, a large catalytic RNA and a small protein component assemble to recognize and accurately cleave ptRNA and tRNA-like molecular scaffolds. Substrate recognition of ptRNA by bacterial RNase P requires RNA-RNA shape complementarity, intermolecular base pairing, and a dynamic protein-ptRNA binding interface. To gain insight into the binding specificity and dynamics of the bacterial protein-ptRNA interface, we report the backbone and side chain 1H, 13C, and 15N resonance assignments of the hyperthermophilic Thermatoga maritima RNase P protein in solution at 318*K. Our data confirm the formation of a stable RNA recognition motif (RRM) with intrinsic heterogeneity at both the N- and C-terminus of the protein, consistent with available structural information. Comprehensive resonance assignments of the bacterial RNase P protein serve as an important first step in understanding how coupled RNA binding and protein-RNA conformational changes give rise to ribonucleoprotein function.
PMID: 29450823 [PubMed - as supplied by publisher]
[NMR paper] NMR structure of the conserved hypothetical protein TM0487 from Thermotoga maritima: implications for 216 homologous DUF59 proteins.
NMR structure of the conserved hypothetical protein TM0487 from Thermotoga maritima: implications for 216 homologous DUF59 proteins.
Related Articles NMR structure of the conserved hypothetical protein TM0487 from Thermotoga maritima: implications for 216 homologous DUF59 proteins.
Protein Sci. 2005 Nov;14(11):2880-6
Authors: Almeida MS, Herrmann T, Peti W, Wilson IA, Wüthrich K
The NMR structure of the conserved hypothetical protein TM0487 from Thermotoga maritima represents an alpha/beta-topology formed by the regular secondary structures...
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[NMR paper] NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima.
NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima.
Related Articles NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima.
Proteins. 2005 Aug 15;60(3):552-7
Authors: Columbus L, Peti W, Etezady-Esfarjani T, Herrmann T, Wüthrich K
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[NMR paper] NMR structure of the conserved hypothetical protein TM0979 from Thermotoga maritima.
NMR structure of the conserved hypothetical protein TM0979 from Thermotoga maritima.
Related Articles NMR structure of the conserved hypothetical protein TM0979 from Thermotoga maritima.
Proteins. 2005 May 1;59(2):387-90
Authors: Peti W, Herrmann T, Zagnitko O, Grzechnik SK, Wüthrich K
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[NMR paper] NMR solution structure of Thermotoga maritima protein TM1509 reveals a Zn-metalloprot
NMR solution structure of Thermotoga maritima protein TM1509 reveals a Zn-metalloprotease-like tertiary structure.
Related Articles NMR solution structure of Thermotoga maritima protein TM1509 reveals a Zn-metalloprotease-like tertiary structure.
J Struct Funct Genomics. 2005;6(1):51-62
Authors: Penhoat CH, Li Z, Atreya HS, Kim S, Yee A, Xiao R, Murray D, Arrowsmith CH, Szyperski T
The 150-residue protein TM1509 is encoded in gene YF09_THEMA of Thermotoga maritima. TM1509 has so far no functional annotation and belongs to protein family...
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[NMR paper] NMR for structural proteomics of Thermotoga maritima: screening and structure determi
NMR for structural proteomics of Thermotoga maritima: screening and structure determination.
Related Articles NMR for structural proteomics of Thermotoga maritima: screening and structure determination.
J Struct Funct Genomics. 2004;5(3):205-15
Authors: Peti W, Etezady-Esfarjani T, Herrmann T, Klock HE, Lesley SA, Wüthrich K
This paper describes the NMR screening of 141 small (
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[NMR paper] NMR assignment of the conserved hypothetical protein TM1290 of Thermotoga maritima.
NMR assignment of the conserved hypothetical protein TM1290 of Thermotoga maritima.
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J Biomol NMR. 2003 Feb;25(2):167-8
Authors: Etezady-Esfarjani T, Peti W, Wüthrich K
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[NMR paper] NMR assignment of the full-length ribosomal protein L11 from Thermotoga maritima.
NMR assignment of the full-length ribosomal protein L11 from Thermotoga maritima.
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J Biomol NMR. 2003 Feb;25(2):163-4
Authors: Ilin S, Hoskins A, Schwalbe H, Wöhnert J
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[NMR paper] An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1[Fe4
An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1 ferredoxin.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1 ferredoxin.
Eur J Biochem. 1996 May 1;237(3):726-35
Authors: Sticht H, Wildegger G, Bentrop D, Darimont B, Sterner R, Rösch P
The solution structure of the 60-residue 1 ferredoxin from the hyperthermophilic...