NMR paper Molecular imaging of cancer cells using a bacteriophage-based 129Xe NMR biosensor.

		BioNMR > Educational resources > Journal club
[NMR paper] Molecular imaging of cancer cells using a bacteriophage-based 129Xe NMR biosensor.

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

10-19-2013, 03:22 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,714

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Molecular imaging of cancer cells using a bacteriophage-based 129Xe NMR biosensor.

Related Articles Molecular imaging of cancer cells using a bacteriophage-based 129Xe NMR biosensor.

Angew Chem Int Ed Engl. 2013 Apr 26;52(18):4849-53

Authors: Palaniappan KK, Ramirez RM, Bajaj VS, Wemmer DE, Pines A, Francis MB

PMID: 23554263 [PubMed - indexed for MEDLINE]

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Design of a novel class of protein-based magnetic resonance imaging contrast agents for the molecular imaging of cancer biomarkers. Design of a novel class of protein-based magnetic resonance imaging contrast agents for the molecular imaging of cancer biomarkers. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-2250-98-WileyOnlineLibrary-Button_120x27px_FullText.gif Related Articles Design of a novel class of protein-based magnetic resonance imaging contrast agents for the molecular imaging of cancer biomarkers. Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2013 Jan 17; Authors: Xue S, Qiao J, Pu F, Cameron M, Yang JJ Abstract Magnetic...	nmrlearner	Journal club	0	02-03-2013 10:19 AM
Post-Doctoral Fellow, Molecular Imaging in Breast Cancer Research, Radiology Department - NMR Research/Oncology Section - Glunde Lab, Johns Hopkins University School of Medicine, Baltimore, MD, United States Post-Doctoral Fellow, Molecular Imaging in Breast Cancer Research, Radiology Department - NMR Research/Oncology Section - Glunde Lab, Johns Hopkins University School of Medicine, Baltimore, MD, United States Vacancy: Post-Doctoral Fellow, Molecular Imaging in Breast Cancer Research Period: up to 5 years Starting date: Immediately Place of work: Baltimore, Maryland, USA Project description An NIH-funded research project at The Johns Hopkins University... More...	nmrlearner	Job marketplace	0	12-17-2011 04:44 AM
STD and trNOESY NMR study of receptor-ligand interactions in living cancer cells. STD and trNOESY NMR study of receptor-ligand interactions in living cancer cells. STD and trNOESY NMR study of receptor-ligand interactions in living cancer cells. Chembiochem. 2011 Mar 21;12(5):695-9 Authors: Potenza D, Vasile F, Belvisi L, Civera M, Araldi EM	nmrlearner	Journal club	0	07-19-2011 07:52 PM
[NMR tweet] Imaging of Prostate and Breast Cancer Bone Metastases Using Magnetic Resonance Imaging and Nuclear Medicine T... http://1.usa.gov/fZBOle Imaging of Prostate and Breast Cancer Bone Metastases Using Magnetic Resonance Imaging and Nuclear Medicine T... http://1.usa.gov/fZBOle Published by BreastCaStudy (Breast Cancer Study) on 2011-04-21T13:43:49Z Source: Twitter	nmrlearner	Twitter NMR	0	04-21-2011 01:50 PM
[NMR tweet] RT @BrightSideNews: Microchip and Micro-Nuclear Magnetic Resonance Helps Detect Cancer Cells: http://bit.ly/microNMR RT @BrightSideNews: Microchip and Micro-Nuclear Magnetic Resonance Helps Detect Cancer Cells: http://bit.ly/microNMR Published by anshelsag (Anshel Sag) on 2011-03-02T19:09:02Z Source: Twitter	nmrlearner	Twitter NMR	0	03-02-2011 07:11 PM
Microchip Helps Detect Cancer Cells - Bright Side of News* http://nt2.ggpht.com/news/tbn/Nvdm4TiOKJNAiM/6.jpg Bright Side of News* <img alt="" height="1" width="1" /> Microchip Helps Detect Cancer Cells Bright Side of News* A micro nuclear magnetic resonance (microNMR) chip uses magnetic nanoparticles to measure protein levels to detect specific markers that indicate the presence of cancer. An app presents a readout on the phone's display within an hour. ... Cancer detection device uses nanotechnology for quicker, cheaper, more ...Digitaltrends.com Smart Phone Device May Make Cancer Diagnosis Faster, Easier, Less ExpensiveEmpowHer all 3...	nmrlearner	Online News	0	03-02-2011 02:03 PM
[NMR tweet] Microchip and Micro-Nuclear Magnetic Resonance Helps Detect Cancer Cells: http://bit.ly/microNMR Microchip and Micro-Nuclear Magnetic Resonance Helps Detect Cancer Cells: http://bit.ly/microNMR Published by BrightSideNews (BrightSideNews) on 2011-03-02T12:26:23Z Source: Twitter	nmrlearner	Twitter NMR	0	03-02-2011 01:02 PM
[NMR paper] Kinetics of choline transport and phosphorylation in human breast cancer cells; NMR a Kinetics of choline transport and phosphorylation in human breast cancer cells; NMR application of the zero trans method. Related Articles Kinetics of choline transport and phosphorylation in human breast cancer cells; NMR application of the zero trans method. Anticancer Res. 1996 May-Jun;16(3B):1375-80 Authors: Katz-Brull R, Degani H The mechanism and kinetics of choline transport and phosphorylation in MCF7 human breast cancer cells was studied by 31P, 13C and 2H NMR, applying the zero trans method. Choline was transported by a...	nmrlearner	Journal club	0	08-22-2010 02:27 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off