Related ArticlesModern analytics for naturally derived complex drug substances: NMR and MS tests for protamine sulfate from chum salmon.
Anal Bioanal Chem. 2015 Jan;407(3):749-59
Authors: Gucinski AC, Boyne MT, Keire DA
Abstract
This work describes orthogonal NMR and MS tests for the structure and composition of the drug protamine sulfate derived from chum salmon. The spectral response pattern obtained by 1D-(1)H-NMR and MS methods from salmon protamine, a mixture of four predominant peptide chains, is dependent on the amino acid sequence and abundance of each peptide. Thus, an assay was developed based on the ratios of alanine, glycine and arginine amino acid residue NMR peaks (relative to the arginine C?H proton signal) in this mixture that are unique to the salmon source. In addition, MS analysis provided sensitive sequence determination and impurity analysis based on shifts from exact masses. Spectra from protamine sulfate active pharmaceutical ingredient (API) suppliers and from a formulated drug product purchased from the US market were examined. Based on these marketplace survey data, NMR acceptance criteria for chum salmon derived protamine sulfate could be based on the absence of aromatic amino acid signals and on ratios of Ala ?H/Arg ?H, Gly ?H/Arg ?H and Arg ?H/Arg ?H integrated areas of 2.4 ± 1%, 9.4 ± 3% and 50 ± 5%, respectively. For MS, acceptance criteria based on the presence of specific mass to charge (m/z) ratio peaks (m/z = +8 of 530.455, 540.841, 532.208 and 508.950) could be used for the four major peptides present in the mixture with relative abundances of 17 ± 1%, 31 ± 2%, 27 ± 1% and 25 ± 3%, respectively. The specificity of the combined NMR and MS assay was tested by comparison to data obtained from herring protamine which contains a different mixture of peptides with related amino acid sequences. Both assays were able to clearly distinguish protamine derived from these different natural sources.
[NMR paper] Structure of pravastatin and its complex with sodium dodecyl sulfate micelles studied by NMR spectroscopy.
Structure of pravastatin and its complex with sodium dodecyl sulfate micelles studied by NMR spectroscopy.
http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-2250-98-WileyOnlineLibrary_FullTextOnline_120x27.gif Related Articles Structure of pravastatin and its complex with sodium dodecyl sulfate micelles studied by NMR spectroscopy.
Magn Reson Chem. 2015 Feb;53(2):110-4
Authors: Galiullina LF, Rakhmatullin IZ, Klochkova EA, Aganov AV, Klochkov VV
Abstract
The aim of this work was...
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[NMR paper] Collaborative development for setup, execution, sharing and analytics of complex NMR experiments.
Collaborative development for setup, execution, sharing and analytics of complex NMR experiments.
Related Articles Collaborative development for setup, execution, sharing and analytics of complex NMR experiments.
J Magn Reson. 2013 Dec 16;
Authors: Irvine AG, Slynko V, Nikolaev Y, Senthamarai RR, Pervushin K
Abstract
Factory settings of NMR pulse sequences are rarely ideal for every scenario in which they are utilised. The optimisation of NMR experiments has for many years been performed locally, with implementations often specific to an...
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[NMR paper] Collaborative development for setup, execution, sharing and analytics of complex NMR experiments
Collaborative development for setup, execution, sharing and analytics of complex NMR experiments
Publication date: Available online 16 December 2013
Source:Journal of Magnetic Resonance</br>
Author(s): Alistair G. Irvine , Vadim Slynko , Yaroslav Nikolaev , Russell R.P. Senthamarai , Konstantin Pervushin</br>
Factory settings of NMR pulse sequences are rarely ideal for every scenario in which they are utilised. The optimization of NMR experiments has for many years been performed locally, with implementations often specifi c to an individual spectrometer....
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12-16-2013 10:09 AM
[NMR paper] NMR investigations of structural and dynamics features of natively unstructured drug peptide - salmon calcitonin: implication to rational design of potent sCT analogs.
NMR investigations of structural and dynamics features of natively unstructured drug peptide - salmon calcitonin: implication to rational design of potent sCT analogs.
http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-2250-98-WileyOnlineLibrary-Button_120x27px_FullText.gif Related Articles NMR investigations of structural and dynamics features of natively unstructured drug peptide - salmon calcitonin: implication to rational design of potent sCT analogs.
J Pept Sci. 2013 Jan;19(1):33-45
Authors: Rawat A, Kumar D
...
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13C-Labeled Heparan Sulfate Analogue as a Tool To Study Protein/Heparan Sulfate Interactions by NMR Spectroscopy: Application to the CXCL12? Chemokine
13C-Labeled Heparan Sulfate Analogue as a Tool To Study Protein/Heparan Sulfate Interactions by NMR Spectroscopy: Application to the CXCL12? Chemokine
Ce?dric Laguri, Nicolas Sapay, Jean-Pierre Simorre, Bernhard Brutscher, Anne Imberty, Pierre Gans and Hugues Lortat-Jacob
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja201753e/aop/images/medium/ja-2011-01753e_0006.gif
Journal of the American Chemical Society
DOI: 10.1021/ja201753e
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA...
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13C-labeled heparan sulfate analogue as a tool to study protein/heparan sulfate interaction by NMR spectroscopy. Application to the CXCL12? chemokine.
13C-labeled heparan sulfate analogue as a tool to study protein/heparan sulfate interaction by NMR spectroscopy. Application to the CXCL12? chemokine.
13C-labeled heparan sulfate analogue as a tool to study protein/heparan sulfate interaction by NMR spectroscopy. Application to the CXCL12? chemokine.
J Am Chem Soc. 2011 Jun 2;
Authors: Laguri C, Sapay N, Simorre JP, Brutscher B, Imberty A, Gans P, Lortat-Jacob H
Heparan sulfate, a polysaccharide of the glycosaminoglycan family characterized by a unique level of complexity, has emerged as a key...
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NMR derived topology of a GFP-photoprotein energy transfer complex.
NMR derived topology of a GFP-photoprotein energy transfer complex.
Related Articles NMR derived topology of a GFP-photoprotein energy transfer complex.
J Biol Chem. 2010 Oct 6;
Authors: Titushin MS, Feng Y, Stepanyuk GA, Li Y, Markova SV, Golz S, Wang BC, Lee J, Wang J, Vysotski ES, Liu ZJ
Forster resonance energy transfer within a protein-protein complex has previously been invoked to explain emission spectral modulation observed in several bioluminescence systems. Here we present a spatial structure of a complex of the Ca2+-regulated...
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[NMR paper] NMR-derived model for a peptide-antibody complex.
NMR-derived model for a peptide-antibody complex.
Related Articles NMR-derived model for a peptide-antibody complex.
Biochemistry. 1990 Oct 30;29(43):10032-41
Authors: Zilber B, Scherf T, Levitt M, Anglister J
The TE34 monoclonal antibody against cholera toxin peptide 3 (CTP3; VEVPGSQHIDSQKKA) was sequenced and investigated by two-dimensional transferred NOE difference spectroscopy and molecular modeling. The VH sequence of TE34, which does not bind cholera toxin, shares remarkable homology to that of TE32 and TE33, which are both anti-CTP3...