BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 04-03-2020, 09:41 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Metabolite profile based on 1H NMR of broiler chicken breasts affected by wooden breast myodegeneration.

Metabolite profile based on 1H NMR of broiler chicken breasts affected by wooden breast myodegeneration.

Related Articles Metabolite profile based on 1H NMR of broiler chicken breasts affected by wooden breast myodegeneration.

Food Chem. 2020 Apr 25;310:125852

Authors: Wang Y, Yang Y, Pan D, He J, Cao J, Wang H, Ertbjerg P

Abstract
The objective was to characterize the effect of wooden breast (WB) myodegeneration on the metabolite profile of chicken meat by 1H NMR and multivariate data analysis. The results displayed that the metabonome of chicken breast consisted predominantly of 30 metabolites, including amino acids, organic acids, carbohydrates, alkaloids, nucleosides and their derivatives. WB-affected samples showed higher leucine, valine, alanine, glutamate, lysine, lactate, succinate, taurine, glucose, and 5'-IMP levels, but lower histidine, ?-alanine, acetate, creatine, creatinine, anserine and nicotinamide adenine dinucleotide levels compared to normal fillets (p < 0.05). In conclusion, results indicated that WB-affected fillets possessed a unique biochemical signature. This unique profile could identify candidate biomarkers for diagnostic utilization and provide mechanistic insight into biochemical processes leading to WB myopathy in commercial broiler chickens.


PMID: 31735464 [PubMed - indexed for MEDLINE]



More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Impact of chemotherapy on metabolic reprogramming: Characterization of the metabolic profile of breast cancer MDA-MB-231 cells using (1)H HR-MAS NMR spectroscopy.
Impact of chemotherapy on metabolic reprogramming: Characterization of the metabolic profile of breast cancer MDA-MB-231 cells using (1)H HR-MAS NMR spectroscopy. Related Articles Impact of chemotherapy on metabolic reprogramming: Characterization of the metabolic profile of breast cancer MDA-MB-231 cells using (1)H HR-MAS NMR spectroscopy. J Pharm Biomed Anal. 2017 Sep 12;146:324-328 Authors: Maria RM, Altei WF, Selistre-de-Araujo HS, Colnago LA Abstract Doxorubicin, cisplatin, and tamoxifen are part of many chemotherapeutic...
nmrlearner Journal club 0 09-16-2017 09:58 PM
[NMR paper] Effects of doxorubicin, cisplatin, and tamoxifen on the metabolic profile of human breast cancer MCF-7 cells as determined by 1H HR-MAS NMR.
Effects of doxorubicin, cisplatin, and tamoxifen on the metabolic profile of human breast cancer MCF-7 cells as determined by 1H HR-MAS NMR. Effects of doxorubicin, cisplatin, and tamoxifen on the metabolic profile of human breast cancer MCF-7 cells as determined by 1H HR-MAS NMR. Biochemistry. 2017 Apr 05;: Authors: Maria RM, Altei WF, Selistre-de-Araújo HS, Colnago LA Abstract Doxorubicin, cisplatin, and tamoxifen are part of many chemotherapeutic regimens. However, there are limited studies investigating the way...
nmrlearner Journal club 0 04-06-2017 12:16 PM
[NMR paper] (1)H NMR-Based Metabolite Profiling of Plasma in a Rat Model of Chronic Kidney Disease.
(1)H NMR-Based Metabolite Profiling of Plasma in a Rat Model of Chronic Kidney Disease. (1)H NMR-Based Metabolite Profiling of Plasma in a Rat Model of Chronic Kidney Disease. PLoS One. 2014 Jan 20;9(1):e85445 Authors: Kim JA, Choi HJ, Kwon YK, Ryu do H, Kwon TH, Hwang GS Abstract Chronic kidney disease (CKD) is characterized by the gradual loss of the kidney function to excrete wastes and fluids from the blood. (1)H NMR-based metabolomics was exploited to investigate the altered metabolic pattern in rats with CKD induced by surgical...
nmrlearner Journal club 0 01-28-2014 11:53 AM
Nuclear magnetic resonance (NMR)-based drug metabolite profiling.
Nuclear magnetic resonance (NMR)-based drug metabolite profiling. Nuclear magnetic resonance (NMR)-based drug metabolite profiling. Methods Mol Biol. 2011;708:299-319 Authors: Lenz EM The identification of drug metabolites in biofluids such as urine, plasma and bile is an important step in drug discovery and development. Proton nuclear magnetic resonance ((1)H-NMR) spectroscopy can provide detailed information regarding the structural transformation of a compound as a consequence of metabolism. However, successful identification of drug...
nmrlearner Journal club 0 04-09-2011 10:57 AM
[NMR tweet] Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening: As e
Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening: As explained in the previous arti... http://bit.ly/bcqLcs Published by soni2006 (Rajinder Soni) on 2010-10-16T05:39:39Z Source: Twitter
nmrlearner Twitter NMR 0 10-16-2010 05:58 AM
[NMR tweet] Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening: As e
Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening: As explained in the previous arti... http://bit.ly/bcqLcs Published by soni2006 (Rajinder Soni) on 2010-10-16T05:39:39Z Source: Twitter
nmrlearner Twitter NMR 0 10-16-2010 05:58 AM
[NMR tweet] #hubpages Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Scree
#hubpages Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening http://bit.ly/bcqLcs Published by Q2A4U (Question_Answer) on 2010-10-16T04:49:29Z Source: Twitter
nmrlearner Twitter NMR 0 10-16-2010 05:58 AM
[NMR tweet] Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening http
Use of Nuclear Magnetic Resonance and Breast Biopsy for Breast Cancer Screening http://ping.fm/eCNX2 Published by soni2006 (Rajinder Soni) on 2010-10-16T04:14:14Z Source: Twitter
nmrlearner Twitter NMR 0 10-16-2010 04:47 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 01:49 PM.


Map