Related ArticlesThe ?-helical C-terminal domain of full-length recombinant PrP converts to an in-register parallel ?-sheet structure in PrP fibrils: Evidence from solid state NMR.
Biochemistry. 2010 Oct 6;
Authors: Tycko R, Savtchenko R, Ostapchenko VG, Makarava N, Baskakov IV
We report the results of solid state nuclear magnetic (NMR) measurements on amyloid fibrils formed by the full-length prion protein PrP (residues 23-231, Syrian hamster sequence). Measurements of intermolecular 13C-13C dipole-dipole couplings in selectively carbonyl-labeled samples indicate that ?-sheets in these fibrils have an in-register parallel structure, as previously observed in amyloid fibrils associated with Alzheimer's disease and type 2 diabetes and in yeast prion fibrils. Two-dimensional 13C-13C and 15N-13C solid state NMR spectra of a uniformly 15N,13C-labeled sample indicate that a relatively small fraction of the full sequence, localized to the C-terminal end, forms the structurally ordered, immobilized core. Although unique site-specific assignments of the solid state NMR signals can not be obtained from these spectra, analysis with a Monte Carlo/simulated annealing algorithm suggests that the core is comprised primarily of residues in the 173-224 range. These results are consistent with earlier electron paramagnetic resonance studies of fibrils formed by residues 90-231 of the human PrP sequence, formed under somewhat different conditions [N.J. Cobb, F.D. Sonnichsen, H. McHaourab, and W.K. Surewicz (2007) Proc. Natl. Acad. Sci. U.S.A. 104, 18946-18951], suggesting that an in-register parallel ?-sheet structure formed by the C-terminal end may be a general feature of PrP fibrils prepared in vitro.
PMID: 20925423 [PubMed - as supplied by publisher]
[NMR paper] Mapping the binding site of full length HIV-1 Nef on human Lck SH3 by NMR spectroscop
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J Biomed Sci. 2005;12(3):451-6
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The Nef protein of human immunodeficiency virus type 1 (HIV-1) is known to directly bind to the SH3 domain of human lymphocyte specific kinase (Lck) via a proline-rich region located in the amino terminal part of Nef. To address the question whether Nef binding to Lck SH3 involves...
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J Mol Biol. 2004 Nov 5;343(5):1391-408
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J Am Chem Soc. 2004 Mar 3;126(8):2439-46
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Vpu is an 81-residue integral membrane protein encoded in the HIV-1 genome that is of considerable interest because it plays important roles in the release of virus particles...
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Protein Sci. 2004 Feb;13(2):549-54
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Staphylococcal protein A (SpA) is a virulence factor from Staphylococcus aureus that is able to bind to...
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J Am Chem Soc. 2003 Jun 18;125(24):7230-7
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Fibrous proteins unlike globular proteins, contain repetitive amino acid sequences, giving rise...
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[NMR paper] NMR characterization of the full-length recombinant murine prion protein, mPrP(23-231
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http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles NMR characterization of the full-length recombinant murine prion protein, mPrP(23-231).
FEBS Lett. 1997 Aug 18;413(2):282-8
Authors: Riek R, Hornemann S, Wider G, Glockshuber R, Wüthrich K
The recombinant murine prion protein, mPrP(23-231), was expressed in E. coli with uniform 15N-labeling. NMR experiments showed that the previously...