A GiganticMolecular Wheel of {Gd140}:A New Member of the Molecular Wheel Family

		BioNMR > Educational resources > Journal club
A GiganticMolecular Wheel of {Gd140}:A New Member of the Molecular Wheel Family

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

12-07-2017, 11:34 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

A GiganticMolecular Wheel of {Gd140}:A New Member of the Molecular Wheel Family

A GiganticMolecular Wheel of {Gd140}:A New Member of the Molecular Wheel Family

Xiu-Ying Zheng, You-Hong Jiang, Gui-Lin Zhuang, Da-Peng Liu, Hong-Gang Liao, Xiang-Jian Kong, La-Sheng Long and Lan-Sun Zheng

Journal of the American Chemical Society
DOI: 10.1021/jacs.7b11112

Source: Journal of the American Chemical Society

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Structural Determinants of Improved Fluorescence ina Family of Bacteriophytochrome-Based Infrared Fluorescent Proteins:Insights from Continuum Electrostatic Calculations and Molecular DynamicsSimulations Structural Determinants of Improved Fluorescence ina Family of Bacteriophytochrome-Based Infrared Fluorescent Proteins:Insights from Continuum Electrostatic Calculations and Molecular DynamicsSimulations http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.6b00295/20160729/images/medium/bi-2016-00295b_0009.gif Biochemistry DOI: 10.1021/acs.biochem.6b00295 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/tK0C2sEP34U More...	nmrlearner	Journal club	0	07-30-2016 04:57 AM
Protein Methyltransferases: A Distinct, Diverse, andDynamic Family of Enzymes Protein Methyltransferases: A Distinct, Diverse, andDynamic Family of Enzymes http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.5b01129/20151222/images/medium/bi-2015-01129z_0010.gif Biochemistry DOI: 10.1021/acs.biochem.5b01129 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/5OKPp3n_eiU More...	nmrlearner	Journal club	0	12-28-2015 12:26 AM
Kenilworth BioNMR Team Member Job - NJ, 07033 Kenilworth BioNMR Team Member Job - NJ, 07033 Kenilworth BioNMR Team Member Job - NJ, 07033. jobs.merck.com/job/Kenilworth-BioNMR-Team.../1601352/ More...	nmrlearner	Job marketplace	0	12-21-2011 04:59 PM
[NMR paper] Molecular interactions of the Gbeta binding domain of the Ste20p/PAK family of protei Molecular interactions of the Gbeta binding domain of the Ste20p/PAK family of protein kinases. An isolated but fully functional Gbeta binding domain from Ste20p is only partially folded as shown by heteronuclear NMR spectroscopy. Related Articles Molecular interactions of the Gbeta binding domain of the Ste20p/PAK family of protein kinases. An isolated but fully functional Gbeta binding domain from Ste20p is only partially folded as shown by heteronuclear NMR spectroscopy. J Biol Chem. 2001 Nov 2;276(44):41205-12 Authors: Song J, Chen Z, Xu P, Gingras R,...	nmrlearner	Journal club	0	11-19-2010 08:44 PM
[NMR paper] The dimerization stability of the HLH-LZ transcription protein family is modulated by The dimerization stability of the HLH-LZ transcription protein family is modulated by the leucine zippers: a CD and NMR study of TFEB and c-Myc. Related Articles The dimerization stability of the HLH-LZ transcription protein family is modulated by the leucine zippers: a CD and NMR study of TFEB and c-Myc. Biochemistry. 1994 Sep 20;33(37):11296-306 Authors: Muhle-Goll C, Gibson T, Schuck P, Schubert D, Nalis D, Nilges M, Pastore A In the HLH-LZ protein family, the helix-loop-helix DNA-binding dimerization domain is followed in the sequence by a...	nmrlearner	Journal club	0	08-22-2010 03:29 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off