NMR paper FRET Monitoring of a Nonribosomal Peptide Synthetase Elongation Module Reveals Carrier Protein Shuttling Between Catalytic Domains

		BioNMR > Educational resources > Journal club
[NMR paper] FRET Monitoring of a Nonribosomal Peptide Synthetase Elongation Module Reveals Carrier Protein Shuttling Between Catalytic Domains

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

09-30-2022, 04:26 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,791

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

FRET Monitoring of a Nonribosomal Peptide Synthetase Elongation Module Reveals Carrier Protein Shuttling Between Catalytic Domains

FRET Monitoring of a Nonribosomal Peptide Synthetase Elongation Module Reveals Carrier Protein Shuttling Between Catalytic Domains

Angewandte Chemie International Edition, Accepted Article.

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[ASAP] The Human Fragile X Mental Retardation Protein Inhibits the Elongation Step of Translation through Its RGG and C-Terminal Domains The Human Fragile X Mental Retardation Protein Inhibits the Elongation Step of Translation through Its RGG and C-Terminal Domains https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.0c00534/20200929/images/medium/bi0c00534_0006.gif Biochemistry DOI: 10.1021/acs.biochem.0c00534 http://feeds.feedburner.com/~r/acs/bichaw/~4/yzpP4lQOuiA More...	nmrlearner	Journal club	0	09-29-2020 07:53 PM
[NMR paper] Real-Time In-Organism NMR Metabolomics Reveals Different Roles of AMP-Activated Protein Kinase Catalytic Subunits. Real-Time In-Organism NMR Metabolomics Reveals Different Roles of AMP-Activated Protein Kinase Catalytic Subunits. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-pubmed-acspubs.jpg Related Articles Real-Time In-Organism NMR Metabolomics Reveals Different Roles of AMP-Activated Protein Kinase Catalytic Subunits. Anal Chem. 2020 May 11;: Authors: Nguyen TTM, An YJ, Cha JW, Ko YJ, Lee H, Chung CH, Jeon SM, Lee J, Park S Abstract AMP-activated protein kinase (AMPK in human and AAK in C....	nmrlearner	Journal club	0	05-12-2020 08:32 PM
[ASAP] Catalytic Cycle of Neisseria meningitidis CMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography Catalytic Cycle of Neisseria meningitidis CMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.9b00517/20191003/images/medium/bi9b00517_0009.gif Biochemistry DOI: 10.1021/acs.biochem.9b00517 http://feeds.feedburner.com/~r/acs/bichaw/~4/heIigCTU_BA More...	nmrlearner	Journal club	0	02-29-2020 09:52 PM
[ASAP] Alanine Scanning of YbdZ, an MbtH-like Protein, Reveals Essential Residues for Functional Interactions with Its Nonribosomal Peptide Synthetase Partner EntF Alanine Scanning of YbdZ, an MbtH-like Protein, Reveals Essential Residues for Functional Interactions with Its Nonribosomal Peptide Synthetase Partner EntF https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00552/20180703/images/medium/bi-2018-005525_0008.gif Biochemistry DOI: 10.1021/acs.biochem.8b00552 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/QJjXPpa0z9I More...	nmrlearner	Journal club	0	07-06-2018 09:40 AM
[ASAP] Alanine Scanning of YbdZ, an MbtH-like Protein, Reveals Essential Residues for Functional Interactions with Its Nonribosomal Peptide Synthetase Partner EntF Alanine Scanning of YbdZ, an MbtH-like Protein, Reveals Essential Residues for Functional Interactions with Its Nonribosomal Peptide Synthetase Partner EntF https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00552/20180703/images/medium/bi-2018-005525_0008.gif Biochemistry DOI: 10.1021/acs.biochem.8b00552 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/QJjXPpa0z9I More...	nmrlearner	Journal club	0	07-06-2018 09:40 AM
Manipulating Protein–Protein Interactions inNonribosomal Peptide Synthetase Type II Peptidyl Carrier Proteins Manipulating Protein–Protein Interactions inNonribosomal Peptide Synthetase Type II Peptidyl Carrier Proteins http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00884/20171002/images/medium/bi-2017-00884r_0005.gif Biochemistry DOI: 10.1021/acs.biochem.7b00884 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/XBZg7GcDSJY More...	nmrlearner	Journal club	0	10-03-2017 03:24 AM
Characterization of the Functional Variance in MbtH-likeProtein Interactions with a Nonribosomal Peptide Synthetase Characterization of the Functional Variance in MbtH-likeProtein Interactions with a Nonribosomal Peptide Synthetase http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00517/20170920/images/medium/bi-2017-00517a_0009.gif Biochemistry DOI: 10.1021/acs.biochem.7b00517 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/xqmqyv9xwnM More...	nmrlearner	Journal club	0	09-21-2017 02:38 AM
[NMR paper] (1)H, (13)C and (15)N NMR assignment of CGC-19, a single domain proteic constituent of a non ribosomal peptide synthetase. (1)H, (13)C and (15)N NMR assignment of CGC-19, a single domain proteic constituent of a non ribosomal peptide synthetase. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--production.springer.de-OnlineResources-Logos-springerlink.gif Related Articles (1)H, (13)C and (15)N NMR assignment of CGC-19, a single domain proteic constituent of a non ribosomal peptide synthetase. Biomol NMR Assign. 2013 Apr;7(1):1-4 Authors: Nogaret S, Guittet E, Birlirakis N Abstract CGC-19, a 14 kDa proteic constituent of a non...	nmrlearner	Journal club	0	08-30-2013 04:35 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off