BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 02-24-2021, 05:50 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,734
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Exploring interactions between lipids and amyloid-forming proteins: a review for applying fluorescence and NMR techniques

Exploring interactions between lipids and amyloid-forming proteins: a review for applying fluorescence and NMR techniques

A hallmark of Alzheimer's, Parkinson's, and other amyloid diseases is the assembly of amyloid proteins into amyloid aggregates or fibrils. In many cases, the formation and cytotoxicity of amyloid assemblies are associated with their interaction with cell membranes. Despite studied for many years, the characterization of the interaction is challenged for reasons on the multiple aggregation states of amyloid-forming proteins, transient and weak interactions in the complex system. As several...

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Exploring interactions between lipids and amyloid-forming proteins: a review for applying fluorescence and NMR techniques.
Exploring interactions between lipids and amyloid-forming proteins: a review for applying fluorescence and NMR techniques. Related Articles Exploring interactions between lipids and amyloid-forming proteins: a review for applying fluorescence and NMR techniques. Chem Phys Lipids. 2021 Feb 15;:105062 Authors: Chang Z, Deng J, Zhao W, Yang J Abstract A hallmark of Alzheimer's, Parkinson's, and other amyloid diseases is the assembly of amyloid proteins into amyloid aggregates or fibrils. In many cases, the formation and cytotoxicity...
nmrlearner Journal club 0 02-20-2021 07:45 PM
Researchers use structural biology techniques to understand how lipids bind proteins - News-Medical.net
Researchers use structural biology techniques to understand how lipids bind proteins - News-Medical.net Researchers use structural biology techniques to understand how lipids bind proteins News-Medical.netNormal cells have a complex system of checks and balances that regulate cell division. Read here
nmrlearner Online News 0 04-30-2019 03:58 PM
Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure â?? Biotechnology ... - satPRnews (press release)
Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure â?? Biotechnology ... - satPRnews (press release) <img alt="" height="1" width="1"> Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure â?? Biotechnology ... satPRnews (press release) Unique and innovative methods are being developed for membrane protein extraction, characterization, and structure determination of biologically significant membrane proteins, opening doors in the membrane structural biology market. Scientists are ... and more...
nmrlearner Online News 0 03-11-2018 04:50 AM
Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure - MilTech
Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure - MilTech <img alt="" height="1" width="1"> Exploring Structural Biology: Tools & Techniques Used in the Study of Membrane Protein Structure MilTech Unique and innovative methods are being developed for membrane protein extraction, characterization, and structure determination of biologically significant membrane proteins, opening doors in the membrane structural biology market. Scientists are ... and more &raquo; Read here
nmrlearner Online News 0 01-09-2018 09:41 AM
Solid state NMR of salivary calculi: Proline-rich salivary proteins, citrate, polysaccharides, lipids, and organic–mineral interactions
Solid state NMR of salivary calculi: Proline-rich salivary proteins, citrate, polysaccharides, lipids, and organic–mineral interactions Publication date: Available online 3 January 2016 Source:Comptes Rendus Chimie</br> Author(s): Yang Li, David G. Reid, Dominique Bazin, Michel Daudon, Melinda J. Duer</br> Solid state NMR (ssNMR) can characterize mineral (31P) and organic (13C) components of human salivary stones (n*=*8). All show apatitic 31P spectra. 13C ssNMR indicates more protein, of more consistent composition, than apatitic uroliths, with prominent...
nmrlearner Journal club 0 01-04-2016 07:49 PM
[NMR paper] Interactions of Polyphenols with Plasma Proteins: Insights from Analytical Techniques.
Interactions of Polyphenols with Plasma Proteins: Insights from Analytical Techniques. Related Articles Interactions of Polyphenols with Plasma Proteins: Insights from Analytical Techniques. Curr Drug Metab. 2013 Jan 17; Authors: Jaldappagari S, Balakrishnan S, Hegde AH, Teradal NL, Narayan PS Abstract Phenolic compounds are commonly found in natural sources like plant-based foods and beverages.* These compounds have received much attention due to their unique biological properties. Polyphenols possess a significant binding affinity...
nmrlearner Journal club 0 02-03-2013 10:19 AM
Interactions of gemini surfactants with two model proteins: NMR, CD, and fluorescence spectroscopies
Interactions of gemini surfactants with two model proteins: NMR, CD, and fluorescence spectroscopies 1 March 2012 Publication year: 2012 Source:Journal of Colloid and Interface Science, Volume 369, Issue 1</br> </br> Gemini surfactants have two polar head groups and two hydrocarbon tails. Compared with conventional surfactants, geminis have much lower (?M vs. mM) critical micelle concentrations and possess slower (ms vs. ?s) monomer ? micelle kinetics. The structure of the gemini surfactants studied is ·2Br- where s =4, 5, or 6. Our objective is to reveal the effect...
nmrlearner Journal club 0 02-03-2013 10:13 AM
Exploring NMR ensembles of calcium binding proteins: perspectives to design inhibitors of protein-protein interactions.
Exploring NMR ensembles of calcium binding proteins: perspectives to design inhibitors of protein-protein interactions. Exploring NMR ensembles of calcium binding proteins: perspectives to design inhibitors of protein-protein interactions. BMC Struct Biol. 2011 May 12;11(1):24 Authors: Isvoran A, Badel A, Craescu CT, Miron S, Miteva MA ABSTRACT: BACKGROUND: Disrupting protein-protein interactions by small organic molecules is nowadays a promising strategy employed to block protein targets involved in different pathologies. However, structural...
nmrlearner Journal club 0 05-17-2011 06:21 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:15 PM.


Map