17O NMR Gives Unprecedented Insights into the Structure of Supported Catalysts and Their Interaction with the Silica Carrier
17O NMR Gives Unprecedented Insights into the Structure of Supported Catalysts and Their Interaction with the Silica Carrier
Nicolas Merle, Julien Tre?bosc, Anne Baudouin, Iker Del Rosal, Laurent Maron, Kai Szeto, Marie Genelot, Andre? Mortreux, Mostafa Taoufik, Laurent Delevoye and Re?gis M. Gauvin
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja301085m/aop/images/medium/ja-2012-01085m_0017.gif
Journal of the American Chemical Society
DOI: 10.1021/ja301085m
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA ...
nmrlearner
Journal club
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05-25-2012 07:14 PM
CS23D - generating protein structure from NMR chemical shifts and sequence homology
CS23D website
CS23D is a web server for rapidly generating accurate 3D protein structures using only assigned NMR chemical shifts as input. CS23D uses a combination of maximal subfragment assembly, chemical shift threading, shift-based torsion angle prediction and chemical shift refinement to generate and refine the protein coordinates. CS23D accepts chemical shift files in either SHIFTY or BMRB formats and produces a set of PDB coordinates for the protein normally within 10-15 minutes (3 hours max). CS23D performance is dependent on the completeness of the chemical shift assignments and...
markber
NMR software
0
02-23-2012 09:40 PM
Structure-based prediction of methyl chemical shifts in proteins
Structure-based prediction of methyl chemical shifts in proteins
Abstract Protein methyl groups have recently been the subject of much attention in NMR spectroscopy because of the opportunities that they provide to obtain information about the structure and dynamics of proteins and protein complexes. With the advent of selective labeling schemes, methyl groups are particularly interesting in the context of chemical shift based protein structure determination, an approach that to date has exploited primarily the mapping between protein structures and backbone chemical shifts. In order to...
nmrlearner
Journal club
0
07-15-2011 09:10 PM
[NMR paper] The NMR solution structure and characterization of pH dependent chemical shifts of th
The NMR solution structure and characterization of pH dependent chemical shifts of the beta-elicitin, cryptogein.
Related Articles The NMR solution structure and characterization of pH dependent chemical shifts of the beta-elicitin, cryptogein.
J Biomol NMR. 1998 Nov;12(4):523-34
Authors: Gooley PR, Keniry MA, Dimitrov RA, Marsh DE, Keizer DW, Gayler KR, Grant BR
The NMR structure of the 98 residue beta-elicitin, cryptogein, which induces a defence response in tobacco, was determined using 15N and 13C/15N labelled protein samples. In aqueous...
nmrlearner
Journal club
0
11-17-2010 11:15 PM
[NMR paper] The impact of direct refinement against proton chemical shifts on protein structure d
The impact of direct refinement against proton chemical shifts on protein structure determination by NMR.
Related Articles The impact of direct refinement against proton chemical shifts on protein structure determination by NMR.
J Magn Reson B. 1995 Jun;107(3):293-7
Authors: Kuszewski J, Gronenborn AM, Clore GM
nmrlearner
Journal club
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08-22-2010 03:41 AM
[NMR paper] NMR chemical shifts and structure refinement in proteins.
NMR chemical shifts and structure refinement in proteins.
Related Articles NMR chemical shifts and structure refinement in proteins.
J Biomol NMR. 1993 Sep;3(5):607-12
Authors: Laws DD, de Dios AC, Oldfield E
Computation of the 13C alpha chemical shifts (or shieldings) of glycine, alanine and valine residues in bovine and Drosophila calmodulins and Staphylococcal nuclease, and comparison with experimental values, is reported using a gauge-including atomic orbital quantum-chemical approach. The full approximately 24 ppm shielding range is...
PSSI: secondary structure from chemical shifts
Link to PSSI program
Reference and abstract:
Probability-based protein secondary structure identification using combined NMR chemical-shift data.
Wang Y, Jardetzky O.
Division of Chemical Biology, Department of Molecular Pharmacology, Stanford University, Stanford, California 94305, USA.