NMR paper Efficient Protein-Protein Couplings Mediated by Small Molecules under Mild Conditions

		BioNMR > Educational resources > Journal club
[NMR paper] Efficient Protein-Protein Couplings Mediated by Small Molecules under Mild Conditions

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-14-2022, 08:15 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Efficient Protein-Protein Couplings Mediated by Small Molecules under Mild Conditions

Efficient Protein-Protein Couplings Mediated by Small Molecules under Mild Conditions

Angewandte Chemie International Edition, Accepted Article.

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Binding-Mediated Formation of Ribonucleoprotein Corona for Efficient Delivery and Control of CRISPR/Cas9 Binding-Mediated Formation of Ribonucleoprotein Corona for Efficient Delivery and Control of CRISPR/Cas9 Angewandte Chemie International Edition, EarlyView. More...	nmrlearner	Journal club	0	03-18-2021 05:17 PM
CryoEM to usurp NMR? Small molecules succumb CryoEM to usurp NMR? Small molecules succumb http://www.spectroscopynow.com/common/images/thumbnails/167072a21f4.jpgNuclear magnetic resonance (NMR) spectroscopy has been an invaluable tool for fifty years allowing chemists and others to figure out the structures of a vast range of molecules based on inferring connectivity between the atoms particular in small organic molecules. Now, that relative upstart technique electron cryo-microscopy (cryoEM) has been used to provide routine and unambiguous structural determination of small organic molecules that one might see as augmenting NMR...	nmrlearner	General	0	11-25-2018 06:02 AM
Small Molecules Engage Hot Spots through CooperativeBinding To Inhibit a Tight Protein–Protein Interaction Small Molecules Engage Hot Spots through CooperativeBinding To Inhibit a Tight Protein–Protein Interaction http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.6b01039/20170316/images/medium/bi-2016-010395_0010.gif Biochemistry DOI: 10.1021/acs.biochem.6b01039 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/vNdN17qC8PA More...	nmrlearner	Journal club	0	03-17-2017 08:34 PM
[Stan NMR blog] A new paradigm streamlining the analysis of NMR spectra of small molecules A new paradigm streamlining the analysis of NMR spectra of small molecules Slides of a Talk presented at a Spanish NMR Discussion Group meeting. Source: Stan blog library	nmrlearner	News from NMR blogs	0	02-07-2014 03:11 PM
[Stan NMR blog] A new paradigm steamlining the analysis of NMR spectra of small molecules A new paradigm steamlining the analysis of NMR spectra of small molecules Slides of a Talk presented at a Spanish NMR Discussion Group meeting. Source: Stan blog library	nmrlearner	News from NMR blogs	0	02-05-2014 04:40 AM
MRC Special Issue on NMR of small molecules in anisotropic media MRC Special Issue on NMR of small molecules in anisotropic media http://www.spectroscopynow.com/common/images/thumbnails/13c3df44525.jpgWithin this supplement issue of the international journal, Magnetic Resonance in Chemistry, experts publish their new NMR methodologies for the analysis of small organic molecules oriented in weak alignment media. An emerging field with room for new discoveries and developments, readers will be inspired to bring this knowledge into their everyday work. Source: Spectroscopynow.com	nmrlearner	General	0	02-03-2013 08:49 AM
[Question from NMRWiki Q&A forum] software for 1D-2D spectra assignment for small molecules software for 1D-2D spectra assignment for small molecules Please advice good software for 1D and 2D spectra assignment and structure elucidation,for small organic molecules.I'm really tired of doing these assignments on printed-out spectra with color pencils. Check if somebody has answered this question on NMRWiki QA forum	nmrlearner	News from other NMR forums	0	05-23-2011 09:56 PM
Small molecules may prevent ebola infection - PhysOrg.com <img alt="" height="1" width="1" /> Small molecules may prevent ebola infection PhysOrg.com Exactly how and where these small molecules bind to the virus's protein coat is now being determined through nuclear magnetic resonance spectroscopy, ... and more » Small molecules may prevent ebola infection - PhysOrg.com More...	nmrlearner	Online News	0	01-20-2011 03:28 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off