Related ArticlesDynamical Propertires of N-Isopropylacrylamide Molecules in Water Revealed From (1)H-NMR Studies.
J Phys Chem B. 2015 Dec 16;
Authors: Sasaki S
Abstract
The hydration of alkyl-amide molecules in water is very important for understanding their solubility in water, which related to the phase behavior of polyamides including protein molecules in water. The 1H NMR signals of N-isopropylacrylamide (NIPA) in water were investigated for the purpose to reveal the hydration properties of NIPA in the aqueous HCl solutions, which changes the phase behavior of aqueous NIPA solutions with HCl concentration as reported previously (J. Phys. Chem. B 2011, 115, 12905-12910). The followings were revealed by the present studies. (1) The spin-spin coupling of the amide proton with the methyne proton in the HCl solution was observed when a half width of amide peak (~ ??) was less than about 10 Hz but it was not when ?? was greater than 10 Hz. (2) The ??-value of amide proton increased with an increase in a mole ratio of H2O to NIPA (rH2O ) or with enlargement of the protonated hydration shell, which reduced the energy gap of the cis- and trans-conformations. (3) The ??-value of H2O and its rH2O dependence in the 3M HCl solution changed drastically between rH2O =4.0 and 4.7, in which the hydrophilic hydration shell neighboring the amide extended to form the hydrophobic hydration shell. (4) The ?? of methyl proton decreased monotonously with rH2O . This indicates an increase of the rotational mobility of methyl groups in the hydration shell. These results indicate that the elongating lifetime of cis-conformation of amide coupled with the shortened lifetime of double bonding C-N in amide induces the amide-methyne spin-spin coupling transition and that the cationic state of amide stabilizes the hydrophobic hydration to induce the rotational free motion of amide C-N and the methyl groups.
PMID: 26672807 [PubMed - as supplied by publisher]
[NMR paper] The role of water in protein's behavior: The two dynamical crossovers studied by NMR and FTIR techniques.
The role of water in protein's behavior: The two dynamical crossovers studied by NMR and FTIR techniques.
Related Articles The role of water in protein's behavior: The two dynamical crossovers studied by NMR and FTIR techniques.
Comput Struct Biotechnol J. 2015;13:33-7
Authors: Mallamace F, Corsaro C, Mallamace D, Vasi S, Vasi C, Dugo G
Abstract
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The role of water in proteins behavior: The two dynamical crossovers studied by NMR and FTIR techniques
The role of water in proteins behavior: The two dynamical crossovers studied by NMR and FTIR techniques
Publication date: Available online 15 November 2014
Source:Computational and Structural Biotechnology Journal</br>
Author(s): Francesco Mallamace , Carmelo Corsaro , Domenico Mallamace , Sebastiano Vasi , Cirino Vasi , Giacomo Dugo</br>
The role the solvent plays in determining the biological activity of proteins is of primary importance. Water is the solvent of life and proteins need at least a water monolayer covering their surface in order to become...
[NMR paper] Detection of dynamic water molecules in a microcrystalline sample of the SH3 domain o
Detection of dynamic water molecules in a microcrystalline sample of the SH3 domain of alpha-spectrin by MAS solid-state NMR.
Related Articles Detection of dynamic water molecules in a microcrystalline sample of the SH3 domain of alpha-spectrin by MAS solid-state NMR.
J Biomol NMR. 2005 Apr;31(4):295-310
Authors: Chevelkov V, Faelber K, Diehl A, Heinemann U, Oschkinat H, Reif B
Water molecules are a major determinant of protein stability and are important for understanding protein-protein interactions. We present two experiments which allow to...
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[NMR paper] Water molecules in DNA recognition I: hydration lifetimes of trp operator DNA in solu
Water molecules in DNA recognition I: hydration lifetimes of trp operator DNA in solution measured by NMR spectroscopy.
Related Articles Water molecules in DNA recognition I: hydration lifetimes of trp operator DNA in solution measured by NMR spectroscopy.
J Mol Biol. 1998 Oct 2;282(4):847-58
Authors: Sunnerhagen M, Denisov VP, Venu K, Bonvin AM, Carey J, Halle B, Otting G
The present NMR study investigates the residence times of the hydration water molecules associated with uncomplexed trp operator DNA in solution by measuring intermolecular...
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[NMR paper] Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in
Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution.
Related Articles Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution.
J Biomol NMR. 1998 Jan;11(1):1-15
Authors: Pfeiffer S, Spitzner N, Löhr F, Rüterjans H
The hydration of uncomplexed RNase T1 was investigated by NMR spectroscopy at pH 5.5 and 313 K. Two-dimensional heteronuclear NOE and ROE difference experiments were employed to determine the spatial proximity and the residence times of water molecules at...
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Investigation of the dynamical properties of water in elastin by deuterium Double Qua
Investigation of the dynamical properties of water in elastin by deuterium Double Quantum Filtered NMR.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Investigation of the dynamical properties of water in elastin by deuterium Double Quantum Filtered NMR.
J Magn Reson. 2010 Jul;205(1):86-92
Authors: Sun C, Boutis GS
The anisotropic motion of tightly bound waters of hydration in bovine nuchal ligament elastin has been studied by deuterium Double Quantum Filtered (DQF) NMR....
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[NMR paper] Probing internal water molecules in proteins using two-dimensional 19F-1H NMR.
Probing internal water molecules in proteins using two-dimensional 19F-1H NMR.
Related Articles Probing internal water molecules in proteins using two-dimensional 19F-1H NMR.
J Biomol NMR. 1995 Jun;5(4):415-9
Authors: Cistola DP, Hall KB
A simple approach for detecting internal water molecules in proteins in solution is described. This approach combines 19F-detected heteronuclear Overhauser and exchange spectroscopy (HOESY) with site-specific 19F substitution. The model system employed was intestinal fatty acid-binding protein complexed with...