Dynamic nuclear polarization at high magnetic fields in liquids

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Dynamic nuclear polarization at high magnetic fields in liquids

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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03-09-2012, 09:16 AM

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Dynamic nuclear polarization at high magnetic fields in liquids

Dynamic nuclear polarization at high magnetic fields in liquids

Publication year: 2011
Source:Progress in Nuclear Magnetic Resonance Spectroscopy

C. Griesinger, M. Bennati, H.M. Vieth, C. Luchinat, G. Parigi, P. Höfer, F. Engelke, S.J. Glaser, V. Denysenkov, T.F. Prisner

Graphical Abstract

Graphical abstract Highlights

? High field dynamic nuclear polarization spectrometer for liquid samples have been constructed. ? The field dependence of the Overhauser DNP efficiency has been measured for the first time up to 9.2T. ? High DNP enhancements for liquid samples have been observed at high magnetic fields. ? The enhancements have been compared with results from NMRD, MD and theoretical models. ? Coherent and relaxation effects within fast magnetic field changes have been analyzed.

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