Pages: 12. Rene Andrae, Tim Schulze-Hartung, Peter Melchior et al.
Reduced chi-squared is a very popular method for model assessment, model comparison, convergence diagnostic, and error estimation in astronomy. In this manuscript, we discuss the pitfalls involved in using reduced chi-squared. There are two independent problems: (a) The number of degrees of freedom can only be estimated for linear models. Concerning nonlinear models, the number of degrees of freedom is unknown, i.e., it is not possible to compute the value of reduced chi-squared. (b) Due to random noise in the data, also the value of reduced chi-squared itself is subject to noise, i.e., the value is uncertain. This uncertainty impairs the usefulness of reduced chi-squared for differentiating between models or assessing convergence of a minimisation procedure. The impact of noise on the value of reduced chi-squared is surprisingly large, in particular for small data sets, which are very common in astrophysical problems. We conclude that reduced chi-squared can only be used with due caution for linear models, whereas it must not be used for nonlinear models at all. Finally, we recommend more sophisticated and reliable methods, which are also applicable to nonlinear models.
[NMR paper] Dos and don'ts of reduced chi-squared
From Mendeley Biomolecular NMR group:
Dos and don'ts of reduced chi-squared
Pages: 12. Rene Andrae, Tim Schulze-Hartung, Peter Melchior et al.
Reduced chi-squared is a very popular method for model assessment, model comparison, convergence diagnostic, and error estimation in astronomy. In this manuscript, we discuss the pitfalls involved in using reduced chi-squared. There are two independent problems: (a) The number of degrees of freedom can only be estimated for linear models. Concerning nonlinear models, the number of degrees of freedom is unknown, i.e., it is not possible to...
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10-12-2012 09:58 AM
[NMR paper] Dos and don'ts of reduced chi-squared
From Mendeley Biomolecular NMR group:
Dos and don'ts of reduced chi-squared
Pages: 12. Rene Andrae, Tim Schulze-Hartung, Peter Melchior et al.
Reduced chi-squared is a very popular method for model assessment, model comparison, convergence diagnostic, and error estimation in astronomy. In this manuscript, we discuss the pitfalls involved in using reduced chi-squared. There are two independent problems: (a) The number of degrees of freedom can only be estimated for linear models. Concerning nonlinear models, the number of degrees of freedom is unknown, i.e., it is not possible to...
nmrlearner
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09-28-2012 05:23 PM
[NMR paper] Dos and don'ts of reduced chi-squared
From Mendeley Biomolecular NMR group:
Dos and don'ts of reduced chi-squared
Pages: 12. Rene Andrae, Tim Schulze-Hartung, Peter Melchior et al.
Reduced chi-squared is a very popular method for model assessment, model comparison, convergence diagnostic, and error estimation in astronomy. In this manuscript, we discuss the pitfalls involved in using reduced chi-squared. There are two independent problems: (a) The number of degrees of freedom can only be estimated for linear models. Concerning nonlinear models, the number of degrees of freedom is unknown, i.e., it is not possible to...
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09-14-2012 04:37 PM
Efficient sequential assignments in proteins with reduced dimensionality 3D HN(CA)NH
Efficient sequential assignments in proteins with reduced dimensionality 3D HN(CA)NH
Abstract We present reduced dimensionality (RD) 3D HN(CA)NH for efficient sequential assignment in proteins. The experiment correlates the 15N and 1H chemical shift of a residue (â??iâ??) with those of its immediate N-terminal (i â?? 1) and C-terminal (i + 1) neighbors and provides four-dimensional chemical shift correlations rapidly with high resolution. An assignment strategy is presented which combines the correlations observed in this experiment with amino acid type information obtained from 3D ...
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01-09-2012 08:08 AM
[CNS Yahoo group] Reduced PDBe services between 23 December and 10 January
Reduced PDBe services between 23 December and 10 January
Hi all, This is to inform PDB/EMDB depositors (at PDBe only) and users of PDBe services (http://pdbe.org/) that we will be operating with a reduced level of
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12-23-2010 02:43 AM
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11-18-2010 08:31 PM
[NMR paper] 1H NMR Study of the Reduced Cytochrome c' from Rhodopseudomonas palustris Containing
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Inorg Chem. 1998 Sep 21;37(19):4814-4821
Authors: Bertini I, Dikiy A, Luchinat C, Macinai R, Viezzoli MS
The assignment of the hyperfine shifted signals of the reduced cytochrome c' from Rhodopseudomonas palustris has been obtained through saturation transfer experiments with assigned signals...