Corrigendum to “Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach” [JPNMRS 56/4 360–405]

		BioNMR > Educational resources > Journal club
Corrigendum to “Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach” [JPNMRS 56/4 360–405]

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-09-2012, 09:16 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Corrigendum to “Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach” [JPNMRS 56/4 360–405]

Corrigendum to “Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach” [JPNMRS 56/4 360–405]

Publication year: 2010
Source:Progress in Nuclear Magnetic Resonance Spectroscopy, Volume 57, Issue 3

Eva Meirovitch, Yury E. Shapiro, Antonino Polimeno, Jack H. Freed

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
A Slowly Relaxing RigidBiradical for Efficient DynamicNuclear Polarization Surface-Enhanced NMR Spectroscopy: ExpeditiousCharacterization of Functional Group Manipulation in Hybrid Materials A Slowly Relaxing RigidBiradical for Efficient DynamicNuclear Polarization Surface-Enhanced NMR Spectroscopy: ExpeditiousCharacterization of Functional Group Manipulation in Hybrid Materials Alexandre Zagdoun, Gilles Casano, Olivier Ouari, Giuseppe Lapadula, Aaron J. Rossini, Moreno Lelli, Mathieu Baffert, David Gajan, Laurent Veyre, Werner E. Maas, Melanie Rosay, Ralph T. Weber, Chloe? Thieuleux, Christophe Coperet, Anne Lesage, Paul Tordo and Lyndon Emsley ...	nmrlearner	Journal club	0	01-18-2012 03:07 AM
Interaction Tensors and Local Dynamics in Common Structural Motifs of Nitrogen: A Solid-State 14N NMR and DFT Study Interaction Tensors and Local Dynamics in Common Structural Motifs of Nitrogen: A Solid-State 14N NMR and DFT Study Luke A. O’Dell, Robert W. Schurko, Kristopher J. Harris, Jochen Autschbach and Christopher I. Ratcliffe http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja108181y/aop/images/medium/ja-2010-08181y_0020.gif Journal of the American Chemical Society DOI: 10.1021/ja108181y http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/jacsat/~4/RPRAYPgAJxo	nmrlearner	Journal club	0	12-24-2010 03:08 AM
[NMR paper] NMR identification of local structural preferences in HIV-1 protease tethered heterod NMR identification of local structural preferences in HIV-1 protease tethered heterodimer in 6 M guanidine hydrochloride. Related Articles NMR identification of local structural preferences in HIV-1 protease tethered heterodimer in 6 M guanidine hydrochloride. FEBS Lett. 2001 Dec 7;509(2):218-24 Authors: Bhavesh NS, Panchal SC, Mittal R, Hosur RV Understanding protein folding requires complete characterization of all the states of the protein present along the folding pathways. For this purpose nuclear magnetic resonance (NMR) has proved to be...	nmrlearner	Journal club	0	11-19-2010 08:44 PM
[NMR paper] Local structural plasticity of the prion protein. Analysis of NMR relaxation dynamics Local structural plasticity of the prion protein. Analysis of NMR relaxation dynamics. Related Articles Local structural plasticity of the prion protein. Analysis of NMR relaxation dynamics. Biochemistry. 2001 Mar 6;40(9):2743-53 Authors: Viles JH, Donne D, Kroon G, Prusiner SB, Cohen FE, Dyson HJ, Wright PE A template-assisted conformational change of the cellular prion protein (PrP(C)) from a predominantly helical structure to an amyloid-type structure with a higher proportion of beta-sheet is thought to be the causative factor in prion...	nmrlearner	Journal club	0	11-19-2010 08:32 PM
Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach. Related Articles Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach. Prog Nucl Magn Reson Spectrosc. 2010 May;56(4):360-405 Authors: Meirovitch E, Shapiro YE, Polimeno A, Freed JH	nmrlearner	Journal club	0	10-19-2010 04:51 PM
Corrigendum to “BEST-HNN and 2D (HN)NH experiments for rapid backbone assignment in p Corrigendum to “BEST-HNN and 2D (HN)NH experiments for rapid backbone assignment in proteins” Publication year: 2010 Source: Journal of Magnetic Resonance, In Press, Corrected Proof, Available online 15 September 2010</br> Dinesh, Kumar , Subhradip, Paul , Ramakrishna V., Hosur</br> Source: Journal of Magnetic Resonance	nmrlearner	Journal club	0	09-16-2010 04:29 PM
[NMR paper] Investigation of the local structure and dynamics of the H subunit of the mitochondri Investigation of the local structure and dynamics of the H subunit of the mitochondrial glycine decarboxylase using heteronuclear NMR spectroscopy. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-acspubs.jpg Related Articles Investigation of the local structure and dynamics of the H subunit of the mitochondrial glycine decarboxylase using heteronuclear NMR spectroscopy. Biochemistry. 1999 Jun 29;38(26):8334-46 Authors: Guilhaudis L, Simorre JP, Blackledge M, Neuburger M, Bourguignon J, Douce R, Marion D, Gans P The...	nmrlearner	Journal club	0	08-21-2010 04:03 PM
Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach Publication year: 2010 Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 27 March 2010</br> Eva, Meirovitch , Yury E., Shapiro , Antonino, Polimeno , Jack H., Freed</br> More...	nmrlearner	Journal club	0	08-16-2010 03:50 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off