Related ArticlesBioconjugation of proteins with a paramagnetic NMR and fluorescent tag.
Chemistry. 2013 Dec 9;19(50):17141-9
Authors: Huang F, Pei YY, Zuo HH, Chen JL, Yang Y, Su XC
Abstract
Site-specific labeling of proteins with lanthanide ions offers great opportunities for investigating the structure, function, and dynamics of proteins by virtue of the unique properties of lanthanides. Lanthanide-tagged proteins can be studied by NMR, X-ray, fluorescence, and EPR spectroscopy. However, the rigidity of a lanthanide tag in labeling of proteins plays a key role in the determination of protein structures and interactions. Pseudocontact shift (PCS) and paramagnetic relaxation enhancement (PRE) are valuable long-range structure restraints in structural-biology NMR spectroscopy. Generation of these paramagnetic restraints generally relies on site-specific tagging of the target proteins with paramagnetic species. To avoid nonspecific interaction between the target protein and paramagnetic tag and achieve reliable paramagnetic effects, the rigidity, stability, and size of lanthanide tag is highly important in paramagnetic labeling of proteins. Here 4'-mercapto-2,2': 6',2''-terpyridine-6,6''-dicarboxylic acid (4MTDA) is introduced as a a rigid paramagnetic and fluorescent tag which can be site-specifically attached to a protein by formation of a disulfide bond. 4MTDA can be readily immobilized by coordination of the protein side chain to the lanthanide ion. Large PCSs and RDCs were observed for 4MTDA-tagged proteins in complexes with paramagnetic lanthanide ions. At an excitation wavelength of 340 nm, the complex formed by protein-4MTDA and Tb(3+) produces high fluorescence with the main emission at 545 nm. These interesting features of 4MTDA make it a very promising tag that can be exploited in NMR, fluorescence, and EPR spectroscopic studies on protein structure, interaction, and dynamics.
[NMR paper] Exploring NMR methods as a tool to select suitable fluorescent nucleotide analogues.
Exploring NMR methods as a tool to select suitable fluorescent nucleotide analogues.
Exploring NMR methods as a tool to select suitable fluorescent nucleotide analogues.
Org Biomol Chem. 2013 Jul 11;
Authors: Groves P, Strzelecka-Kiliszek A, Sekrecka-Belniak A, Canales A, Jiménez-Barbero J, Bandorowicz-Pikula J, Pikula S, Javier Cañada F
Abstract
Fluorescent analogues provide important tools for biochemical/biophysical research. However, the analogues contain chemical modifications much larger than those known to affect...
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07-12-2013 06:01 PM
[NMR paper] Magic Angle Spinning NMR of Paramagnetic Proteins.
Magic Angle Spinning NMR of Paramagnetic Proteins.
Related Articles Magic Angle Spinning NMR of Paramagnetic Proteins.
Acc Chem Res. 2013 Mar 18;
Authors: Knight MJ, Felli IC, Pierattelli R, Emsley L, Pintacuda G
Abstract
Metal ions are ubiquitous in biochemical and cellular processes. Since many metal ions are paramagnetic due to the presence of unpaired electrons, paramagnetic molecules are an important class of targets for research in structural biology and related fields. Today, NMR spectroscopy plays a central role in the...
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03-20-2013 01:47 PM
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Content Type Journal Article
Pages 1-2
DOI 10.1007/s10858-011-9475-7
Authors
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02-23-2011 11:21 PM
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Erratum to: Paramagnetic labelling of proteins and oligonucleotides for NMR
Content Type Journal Article
Pages 1-2
DOI 10.1007/s10858-011-9475-7
Authors
[NMR paper] Determination of solution structures of paramagnetic proteins by NMR.
Determination of solution structures of paramagnetic proteins by NMR.
Related Articles Determination of solution structures of paramagnetic proteins by NMR.
Eur Biophys J. 1998;27(4):367-75
Authors: Turner DL, Brennan L, Chamberlin SG, Louro RO, Xavier AV
Standard procedures for using nuclear Overhauser enhancements (NOE) between protons to generate structures for diamagnetic proteins in solution from NMR data may be supplemented by using dipolar shifts if the protein is paramagnetic. This is advantageous since the electron -nuclear dipolar...
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[NMR paper] The effects of proteins on [Ca2+] measurement: different effects on fluorescent and N
The effects of proteins on measurement: different effects on fluorescent and NMR methods.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles The effects of proteins on measurement: different effects on fluorescent and NMR methods.
Cell Calcium. 1996 Nov;20(5):425-30
Authors: Matsuda S, Kusuoka H, Hashimoto K, Tsujimura E, Nishimura T
Previous reports showed that the presence of proteins shifts the apparent dissociation constant (Kd) of a fluorescent dye indicator to...