Related ArticlesBiochemical and NMR characterization of the interactions of Vav2-SH2 domain with lipids and the EphA2 juxtamembrane region on membrane.
Biochem J. 2020 Sep 08;:
Authors: Ge L, Wu B, Zhang Y, Wang J, Zhao H, Wang J
Abstract
Vav2 is a ubiquitous guanine nucleotide exchange factor (GEF) for Rho family GTPases that is involved in regulating a wide range of biological processes. It interacts with several tyrosine-phosphorylated*cell surface receptors, including the Eph family receptors, through its SH2 domain. The interaction of Vav2 with EphA2 is crucial for EphA2-mediated tumor angiogenesis. Here we show that Vav2-SH2 domain is a lipid-binding module that can recognize PI(4,5)P2 and PI(3,4,5)P3 lipids weakly but specifically. The specific lipid-binding site in Vav2-SH2 domain was identified by NMR chemical shift perturbation experiments using the head groups of PI(4,5)P2 and PI(3,4,5)P3, both of which bind to Vav2-SH2 with millimolar binding affinities. In addition, the interaction between Vav2-SH2 and the phosphorylated juxtamembrane region (JM) of EphA2 (Y594 phosphorylated) was investigated using NMR techniques. Furthermore, by using a nickel-lipid containing peptide-based nanodiscs system, we studied the binding of Vav2-SH2 to the phosphorylated JM region of EphA2 on lipid membrane and uncovered a role of membrane environment in modulating this protein-protein recognition.
PMID: 32897354 [PubMed - as supplied by publisher]
A Noncanonical Binding Site in the EVH1 Domain ofVasodilator-Stimulated Phosphoprotein Regulates Its Interactions withthe Proline Rich Region of Zyxin
A Noncanonical Binding Site in the EVH1 Domain ofVasodilator-Stimulated Phosphoprotein Regulates Its Interactions withthe Proline Rich Region of Zyxin
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00618/20170823/images/medium/bi-2017-006182_0008.gif
Biochemistry
DOI: 10.1021/acs.biochem.7b00618
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08-24-2017 08:38 AM
[NMR paper] Expression and purification of EPHA2 tyrosine kinase domain for crystallographic and NMR studies.
Expression and purification of EPHA2 tyrosine kinase domain for crystallographic and NMR studies.
Expression and purification of EPHA2 tyrosine kinase domain for crystallographic and NMR studies.
Chembiochem. 2016 Sep 29;
Authors: Gande SL, Saxena K, Sreeramulu S, Linhard V, Kudlinzki D, Heinzlmeir S, Reichert AJ, Skerra A, Kuster B, Schwalbe H
Abstract
The receptor tyrosine kinase EPHA2 is overexpressed in several cancer entities (breast, head and neck, non-small cell lung cancer). Small molecule-based inhibition of the...
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09-30-2016 10:11 AM
[NMR paper] Structural and Biochemical Analysis of Protein–Protein Interactions Between the Acyl-Carrier Protein and Product Template Domain
Structural and Biochemical Analysis of Protein–Protein Interactions Between the Acyl-Carrier Protein and Product Template Domain
In fungal non-reducing polyketide synthases (NR-PKS) the acyl-carrier protein (ACP) carries the growing polyketide intermediate through iterative rounds of elongation, cyclization and product release. This process occurs through a controlled, yet enigmatic coordination of the ACP with its partner enzymes. The transient nature of ACP interactions with these catalytic domains imposes a major obstacle for investigation of the influence of protein–protein...
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09-22-2016 10:41 PM
[NMR paper] NMR Characterization and Membrane Interactions of the Loop Region of Kindlin-3 F1 Subdomain.
NMR Characterization and Membrane Interactions of the Loop Region of Kindlin-3 F1 Subdomain.
Related Articles NMR Characterization and Membrane Interactions of the Loop Region of Kindlin-3 F1 Subdomain.
PLoS One. 2016;11(4):e0153501
Authors: Chua GL, Tan SM, Bhattacharjya S
Abstract
Kindlins-1,2 and 3 are FERM domain-containing cytosolic proteins involved in the activation and regulation of integrin-mediated cell adhesion. Apart from binding to integrin ? cytosolic tails, kindlins and the well characterized integrin-activator...
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04-22-2016 08:45 PM
[NMR paper] (19)F-NMR screening of unrelated antimicrobial peptides shows that membrane interactions are largely governed by lipids.
(19)F-NMR screening of unrelated antimicrobial peptides shows that membrane interactions are largely governed by lipids.
(19)F-NMR screening of unrelated antimicrobial peptides shows that membrane interactions are largely governed by lipids.
Biochim Biophys Acta. 2014 Mar 31;
Authors: Afonin S, Glaser RW, Sachse C, Salgado J, Wadhwani P, Ulrich AS
Abstract
Many amphiphilic antimicrobial peptides permeabilize bacterial membranes via successive steps of binding, re-alignment and/or oligomerization. Here, we have systematically...
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04-06-2014 02:01 AM
[NMR paper] NMR analyses on the interactions of the yeast Tim50 C-terminal region with the presequence and Tim50 core domain.
NMR analyses on the interactions of the yeast Tim50 C-terminal region with the presequence and Tim50 core domain.
NMR analyses on the interactions of the yeast Tim50 C-terminal region with the presequence and Tim50 core domain.
FEBS Lett. 2014 Jan 23;
Authors: Rahman B, Kawano S, Yunoki-Esaki K, Anzai T, Endo T
Abstract
The mitochondrial targeting signal in the presequence of mitochondrial precursor proteins is recognized by Tom20 and subsequently by Tim50 in mitochondria. Yeast Tim50 contains two presequence binding sites in the...
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01-28-2014 11:53 AM
[NMR paper] Isotropic bicelles stabilize the juxtamembrane region of the influenza M2 protein for solution NMR studies.
Isotropic bicelles stabilize the juxtamembrane region of the influenza M2 protein for solution NMR studies.
Related Articles Isotropic bicelles stabilize the juxtamembrane region of the influenza M2 protein for solution NMR studies.
Biochemistry. 2013 Oct 29;
Authors: Claridge JK, Aittoniemi J, Cooper DM, Schnell JR
Abstract
The protein M2 from influenza is a tetrameric membrane protein with several roles in the viral life cycle. The transmembrane helix (TMH) of M2 has proton channel activity that is required for unpackaging the viral...
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10-31-2013 02:18 PM
[NMR paper] Biochemical characterization and NMR studies of the nucleotide-binding domain 1 of mu
Biochemical characterization and NMR studies of the nucleotide-binding domain 1 of multidrug-resistance-associated protein 1: evidence for interaction between ATP and Trp653.
Related Articles Biochemical characterization and NMR studies of the nucleotide-binding domain 1 of multidrug-resistance-associated protein 1: evidence for interaction between ATP and Trp653.
Biochem J. 2003 Dec 15;376(Pt 3):749-56
Authors: Ramaen O, Masscheleyn S, Duffieux F, Pamlard O, Oberkampf M, Lallemand JY, Stoven V, Jacquet E
Multidrug-resistance-associated...