NMR paper Assignment of 1H, 13C and 15N NMR signals in the toluene 4-monooxygenase effector pro

		BioNMR > Educational resources > Journal club
[NMR paper] Assignment of 1H, 13C and 15N NMR signals in the toluene 4-monooxygenase effector pro

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-18-2010, 09:15 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,733

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Assignment of 1H, 13C and 15N NMR signals in the toluene 4-monooxygenase effector pro

Assignment of 1H, 13C and 15N NMR signals in the toluene 4-monooxygenase effector protein.

Related Articles Assignment of 1H, 13C and 15N NMR signals in the toluene 4-monooxygenase effector protein.

J Biomol NMR. 2000 Apr;16(4):359-60

Authors: Hemmi H, Studts JM, Chae YK, Markley JL, Fox BG

PMID: 10826893 [PubMed - indexed for MEDLINE]

Source: PubMed

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR images] NMR The received signals are http://nationalnursingreview.com/wp-content/uploads/2009/11/NMR-224x300.jpg nationalnursingreview.com 30/10/2011 1:40:36 PM GMT NMR The received signals are More...	nmrlearner	NMR pictures	0	10-30-2011 01:39 PM
[NMR paper] Solid-state 31P NMR spectroscopy of microcrystals of the Ras protein and its effector Solid-state 31P NMR spectroscopy of microcrystals of the Ras protein and its effector loop mutants: comparison between crystalline and solution state. Related Articles Solid-state 31P NMR spectroscopy of microcrystals of the Ras protein and its effector loop mutants: comparison between crystalline and solution state. J Mol Biol. 2004 Sep 17;342(3):1033-40 Authors: Iuga A, Spoerner M, Kalbitzer HR, Brunner E Cycling between a GTP bound "on" state and a GDP bound "off" state, guanine nucleotide-binding (GNB) proteins act as molecular switches....	nmrlearner	Journal club	0	11-24-2010 10:01 PM
[NMR paper] Assignment of amide proton signals by combined evaluation of HN, NN and HNCA MAS-NMR Assignment of amide proton signals by combined evaluation of HN, NN and HNCA MAS-NMR correlation spectra. Related Articles Assignment of amide proton signals by combined evaluation of HN, NN and HNCA MAS-NMR correlation spectra. J Biomol NMR. 2003 Mar;25(3):217-23 Authors: van Rossum BJ, Castellani F, Pauli J, Rehbein K, Hollander J, de Groot HJ, Oschkinat H In this paper, we present a strategy for the (1)H(N) resonance assignment in solid-state magic-angle spinning (MAS) NMR, using the alpha-spectrin SH3 domain as an example. A novel 3D...	nmrlearner	Journal club	0	11-24-2010 09:01 PM
[NMR paper] High-pressure NMR study of the complex of a GTPase Rap1A with its effector RalGDS. A High-pressure NMR study of the complex of a GTPase Rap1A with its effector RalGDS. A conformational switch in RalGDS revealed from non-linear pressure shifts. Related Articles High-pressure NMR study of the complex of a GTPase Rap1A with its effector RalGDS. A conformational switch in RalGDS revealed from non-linear pressure shifts. FEBS Lett. 2001 Oct 12;506(3):180-4 Authors: Inoue K, Maurer T, Yamada H, Herrmann C, Horn G, Kalbitzer HR, Akasaka K Unusually large non-linear 1H and 15N nuclear magnetic resonance chemical shifts against...	nmrlearner	Journal club	0	11-19-2010 08:44 PM
[NMR paper] An increase in side chain entropy facilitates effector binding: NMR characterization An increase in side chain entropy facilitates effector binding: NMR characterization of the side chain methyl group dynamics in Cdc42Hs. Related Articles An increase in side chain entropy facilitates effector binding: NMR characterization of the side chain methyl group dynamics in Cdc42Hs. Biochemistry. 2001 Apr 17;40(15):4590-600 Authors: Loh AP, Pawley N, Nicholson LK, Oswald RE Cdc42Hs is a signal transduction protein that is involved in cytoskeletal growth and organization. We describe here the methyl side chain dynamics of three forms of...	nmrlearner	Journal club	0	11-19-2010 08:32 PM
[NMR paper] NMR structure and mutagenesis of the FADD (Mort1) death-effector domain. NMR structure and mutagenesis of the FADD (Mort1) death-effector domain. Related Articles NMR structure and mutagenesis of the FADD (Mort1) death-effector domain. Nature. 1998 Apr 30;392(6679):941-5 Authors: Eberstadt M, Huang B, Chen Z, Meadows RP, Ng SC, Zheng L, Lenardo MJ, Fesik SW When activated, membrane-bound receptors for Fas and tumour-necrosis factor initiate programmed cell death by recruiting the death domain of the adaptor protein FADD to the membrane. FADD then activates caspase 8 (also known as FLICE or MACH) through an...	nmrlearner	Journal club	0	11-17-2010 11:06 PM
[NMR paper] Solution structure of component B from methane monooxygenase derived through heteronu Solution structure of component B from methane monooxygenase derived through heteronuclear NMR and molecular modeling. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-acspubs.jpg Related Articles Solution structure of component B from methane monooxygenase derived through heteronuclear NMR and molecular modeling. Biochemistry. 1999 May 4;38(18):5799-812 Authors: Chang SL, Wallar BJ, Lipscomb JD, Mayo KH Methane monooxygenase (MMO) is a nonheme iron-containing enzyme which consists of three protein components: a...	nmrlearner	Journal club	0	08-21-2010 04:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off