Related Articles3D NMR structure of hen egg gallin (chicken ovo-defensin) reveals a new variation of the beta-defensin fold.
J Biol Chem. 2014 Jan 17;
Authors: Hervé V, Meudal H, Labas V, Réhault Godbert S, Gautron J, Berges M, Guyot N, Delmas AF, Nys Y, Landon C
Abstract
Gallin is a 41-residue protein, first identified as a minor component of hen egg white, and found to be antimicrobial against Escherichia coli. Gallin may participate in the protection of the embryo during its development in the egg. Its sequence is related to antimicrobial ?-defensin peptides. In the present study, gallin was chemically synthesized 1) to further investigate its antimicrobial spectrum, and 2) to solve its 3D NMR structure, and thus gain insight into structure-function relationships, a prerequisite to understand its mode(s) of action. Antibacterial assays confirmed that gallin was active against Escherichia coli, but no additional antibacterial activity was observed against the other Gram-positive or Gram-negative bacteria tested. The 3D structure of gallin, which is the first ovo-defensin structure to have been solved to date, displays a new five-stranded arrangement. The gallin 3D fold contains the three-stranded antiparallel ?-sheet and the disulfide bridge array typical of vertebrate ?-defensins. Gallin can therefore be unambiguously classified as a ?-defensin. However, an additional short two-stranded ?-sheet reveals that gallin, and presumably the other ovo-defensins, form a new structural sub-family of ?-defensins. Moreover, gallin and the other ovo-defensins calculated by homology modelling exhibit atypical hydrophobic surface properties, compared with the already known vertebrate ?-defensins. These specific structural features of gallin might be related to its restricted activity against E. coli, and/or to other yet unknown functions. This work provides initial understanding of a critical sequence-structure-function relationship for the ovo-defensin family.
PMID: 24443564 [PubMed - as supplied by publisher]
30-or nmr spectroscopy reveals unexpected structural variation at the protein-protein interface in mhc class i molecules
30-OR NMR SPECTROSCOPY REVEALS UNEXPECTED STRUCTURAL VARIATION AT THE PROTEIN-PROTEIN INTERFACE IN MHC CLASS I MOLECULES
Publication date: November 2013
Source:Human Immunology, Volume 74, Supplement</br>
Author(s): Andreas Ziegler , Monika Beerbaum , Martin Ballaschk , Natalja Erdmann , Christina Schnick , Anne Diehl , Barbara Uchanska-Ziegler , Peter Schmieder</br>
Aim ?2-microglobulin (?2m) is a small, monomorphic protein non-covalently bound to the heavy chain (HC) in polymorphic major histocompatibility complex (MHC) class I molecules. Given the high...
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[NMR paper] NMR solution structure and condition-dependent oligomerization of the antimicrobial peptide human defensin 5.
NMR solution structure and condition-dependent oligomerization of the antimicrobial peptide human defensin 5.
http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-pubmed-acspubs.jpg Related Articles NMR solution structure and condition-dependent oligomerization of the antimicrobial peptide human defensin 5.
Biochemistry. 2012 Dec 4;51(48):9624-37
Authors: Wommack AJ, Robson SA, Wanniarachchi YA, Wan A, Turner CJ, Wagner G, Nolan EM
Abstract
Human defensin 5 (HD5) is a 32-residue host-defense peptide...
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NMR Solution Structure and Condition-Dependent Oligomerization of the Antimicrobial Peptide Human Defensin 5
NMR Solution Structure and Condition-Dependent Oligomerization of the Antimicrobial Peptide Human Defensin 5
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/bi301255u/aop/images/medium/bi-2012-01255u_0008.gif
Biochemistry
DOI: 10.1021/bi301255u
http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA
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The insect defensin lucifensin from Lucilia sericata
The insect defensin lucifensin from Lucilia sericata
The insect defensin lucifensin from Lucilia sericata
Content Type Journal Article
Category NMR structure note
Pages 1-6
DOI 10.1007/s10858-012-9608-7
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Portrayal of complex dynamic properties of sugarcane defensin 5 by NMR: multiple motions associated with membrane interaction.
Portrayal of complex dynamic properties of sugarcane defensin 5 by NMR: multiple motions associated with membrane interaction.
Portrayal of complex dynamic properties of sugarcane defensin 5 by NMR: multiple motions associated with membrane interaction.
Structure. 2011 Jan 12;19(1):26-36
Authors: de Paula VS, Razzera G, Barreto-Bergter E, Almeida FC, Valente AP
Defensins are essentially ancient natural antibiotics with potent activity extending from lower organisms to humans. Sd5 is a recently described antifungal defensin that appears to be the...
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04-19-2011 11:01 PM
1H NMR-based metabolic profiling reveals inherent biological variation in yeast and nematode model systems
1H NMR-based metabolic profiling reveals inherent biological variation in yeast and nematode model systems
Abstract The application of metabolomics to human and animal model systems is poised to provide great insight into our understanding of disease etiology and the metabolic changes that are associated with these conditions. However, metabolomic studies have also revealed that there is significant, inherent biological variation in human samples and even in samples from animal model systems where the animals are housed under carefully controlled conditions. This inherent biological...
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[NMR paper] Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensin
Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action.
Related Articles Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action.
J Mol Biol. 2002 Jan 25;315(4):749-57
Authors: Almeida MS, Cabral KM, Kurtenbach E, Almeida FC, Valente AP
Pisum sativum defensin 1 (Psd1) is a 46 amino acid residue plant defensin isolated from seeds of pea. The three-dimensional structure in...
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[NMR paper] Two-dimensional 1H NMR study of recombinant insect defensin A in water: resonance ass
Two-dimensional 1H NMR study of recombinant insect defensin A in water: resonance assignments, secondary structure and global folding.
Related Articles Two-dimensional 1H NMR study of recombinant insect defensin A in water: resonance assignments, secondary structure and global folding.
J Biomol NMR. 1992 May;2(3):235-56
Authors: Bonmatin JM, Bonnat JL, Gallet X, Vovelle F, Ptak M, Reichhart JM, Hoffmann JA, Keppi E, Legrain M, Achstetter T
A 500 MHz 2D 1H NMR study of recombinant insect defensin A is reported. This defense protein of 40...