Related Articles1H NMR studies on the catalytic subunit of aspartate transcarbamoylase.
Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):11881-5
Authors: Cohen RE, Takama M, Schachman HK
The 1H NMR spectrum of the catalytic subunit of Escherichia coli aspartate transcarbamoylase (EC 2.1.3.2) was simplified by using strains auxotrophic for the aromatic amino acids and a growth medium containing fully deuterated Trp, Phe, and His and partially deuterated Tyr. 1H resonances for Tyr in the catalytic trimer (M(r) = 10(5)) were partially resolved into five peaks at 27 degrees C, which above 50 degrees C were further resolved to give a distinct resonance for each of the eight Tyr residues in the polypeptide chain. Experiments on chemically modified catalytic subunits and on a mutant form in which Tyr-165 was converted to Ser-165 led to the assignment of resonances for Tyr-165, Tyr-240, and Tyr-185. Binding of the substrate, carbamoyl phosphate, caused shifts of two of the unassigned resonances, and the subsequent binding of the aspartate analog succinate perturbed the resonances corresponding to Tyr-165 and Tyr-240. The bisubstrate analog N-(phosphonacetyl)-L-aspartate produced a spectrum differing considerably from that caused by the combination of carbamoyl phosphate and succinate. The NMR spectrum for the Tyr-165-->Ser mutant trimer showed clearly that the single amino acid substitution caused conformational changes affecting the environment of residues remote from the position of the replacement. In contrast, the inactive mutant subunit in which Gly-128 was replaced by Asp exhibited a spectrum virtually identical to that of the wild-type protein. However, addition of the substrate carbamoyl phosphate caused a marked change in the spectrum of the mutant enzyme, whereas that of the wild-type trimer was altered only slightly, showing that the effect of the amino acid substitution was manifested in the NMR spectrum only with the liganded enzyme.
[NMR paper] Multidimensional NMR identifies the conformational shift essential for catalytic comp
Multidimensional NMR identifies the conformational shift essential for catalytic competence in the 60-kDa Drosophila melanogaster dUTPase trimer.
Related Articles Multidimensional NMR identifies the conformational shift essential for catalytic competence in the 60-kDa Drosophila melanogaster dUTPase trimer.
J Biol Chem. 2004 Apr 23;279(17):17945-50
Authors: Dubrovay Z, Gáspári Z, Hunyadi-Gulyás E, Medzihradszky KF, Perczel A, Vértessy BG
The catalytic mechanism of dUTP pyrophosphatase (dUTPase), responsible for the prevention of uracil...
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[NMR paper] NMR investigation of the catalytic mechanism of arylamine N-acetyltransferase from Sa
NMR investigation of the catalytic mechanism of arylamine N-acetyltransferase from Salmonella typhimurium.
Related Articles NMR investigation of the catalytic mechanism of arylamine N-acetyltransferase from Salmonella typhimurium.
Biochim Biophys Acta. 2003 Mar 17;1620(1-3):8-14
Authors: Delgoda R, Lian LY, Sandy J, Sim E
Arylamine N-acetyltransferases (NAT) are a family of enzymes found in both eucaryotes and procaryotes, which catalyse the N-acetylation of a range of arylamine and hydrazine drugs and carcinogenic arylamines, using acetyl...
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[NMR paper] Measurement of side-chain carboxyl pK(a) values of glutamate and aspartate residues i
Measurement of side-chain carboxyl pK(a) values of glutamate and aspartate residues in an unfolded protein by multinuclear NMR spectroscopy.
Related Articles Measurement of side-chain carboxyl pK(a) values of glutamate and aspartate residues in an unfolded protein by multinuclear NMR spectroscopy.
J Am Chem Soc. 2002 May 22;124(20):5714-7
Authors: Tollinger M, Forman-Kay JD, Kay LE
A triple-resonance NMR pulse scheme is presented for measuring aspartic and glutamic acid side-chain pK(a) values in unfolded protein states where chemical shift...
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[NMR paper] Three-dimensional modeling of the I-TevI homing endonuclease catalytic domain, a GIY-
Three-dimensional modeling of the I-TevI homing endonuclease catalytic domain, a GIY-YIG superfamily member, using NMR restraints and Monte Carlo dynamics.
Related Articles Three-dimensional modeling of the I-TevI homing endonuclease catalytic domain, a GIY-YIG superfamily member, using NMR restraints and Monte Carlo dynamics.
Protein Eng. 2001 Oct;14(10):717-21
Authors: Bujnicki JM, Rotkiewicz P, Kolinski A, Rychlewski L
Using a recent version of the SICHO algorithm for in silico protein folding, we made a blind prediction of the tertiary...
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[NMR paper] NMR studies of the free alpha subunit of human chorionic gonadotropin. Structural inf
NMR studies of the free alpha subunit of human chorionic gonadotropin. Structural influences of N-glycosylation and the beta subunit on the conformation of the alpha subunit.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles NMR studies of the free alpha subunit of human chorionic gonadotropin. Structural influences of N-glycosylation and the beta subunit on the conformation of the alpha subunit.
Eur J Biochem. 1996 Oct 1;241(1):229-42
Authors: ...
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[NMR paper] FTIR and NMR studies on the hydration of a high-M(r) subunit of glutenin.
FTIR and NMR studies on the hydration of a high-M(r) subunit of glutenin.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles FTIR and NMR studies on the hydration of a high-M(r) subunit of glutenin.
Int J Biol Macromol. 1995 Apr;17(2):74-80
Authors: Belton PS, Colquhoun IJ, Grant A, Wellner N, Field JM, Shewry PR, Tatham AS
The hydration behaviour of a purified high-M(r) subunit of glutenin has been studied using Fourier transform infra-red (FTIR) and nuclear magnetic...
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[NMR paper] Proton NMR of Escherichia coli sulfite reductase: studies of the heme protein subunit
Proton NMR of Escherichia coli sulfite reductase: studies of the heme protein subunit with added ligands.
Related Articles Proton NMR of Escherichia coli sulfite reductase: studies of the heme protein subunit with added ligands.
Biochemistry. 1993 Aug 31;32(34):8782-91
Authors: Kaufman J, Siegel LM, Spicer LD
The heme protein subunit of sulfite reductase (SiR-HP; M(r) 64,000) from Escherichia coli as isolated contains the isobacteriochlorin siroheme exchange-coupled to a cluster in the 2+ oxidation state. SiR-HP in the presence of a suitable...
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[NMR paper] 31phospho-NMR demonstration of phosphocysteine as a catalytic intermediate on the Esc
31phospho-NMR demonstration of phosphocysteine as a catalytic intermediate on the Escherichia coli phosphotransferase system EIIMtl.
Related Articles 31phospho-NMR demonstration of phosphocysteine as a catalytic intermediate on the Escherichia coli phosphotransferase system EIIMtl.
J Biol Chem. 1991 Apr 15;266(11):6690-2
Authors: Pas HH, Meyer GH, Kruizinga WH, Tamminga KS, van Weeghel RP, Robillard GT
The mannitol-specific phosphotransferase system transport protein, Enzyme IIMtl, contains two catalytically important phosphorylated amino acid...