BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 06-03-2022, 07:40 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,732
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default [ASAP] Hydride-Containing Eight-Electron Pt/Ag Superatoms: Structure, Bonding, and Multi-NMR Studies

[ASAP] Hydride-Containing Eight-Electron Pt/Ag Superatoms: Structure, Bonding, and Multi-NMR Studies

Tzu-Hao Chiu, Jian-Hong Liao, Franck Gam, Ying-Yann Wu, Xiaoping Wang, Samia Kahlal, Jean-Yves Saillard, and C. W. Liu



Journal of the American Chemical Society
DOI: 10.1021/jacs.2c03715



Source: Journal of the American Chemical Society
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[ASAP] Constraints on the Structure of Fibrils Formed by a Racemic Mixture of Amyloid-? Peptides from Solid-State NMR, Electron Microscopy, and Theory
Constraints on the Structure of Fibrils Formed by a Racemic Mixture of Amyloid-? Peptides from Solid-State NMR, Electron Microscopy, and Theory Jevgenij A. Raskatov, Alejandro R. Foley, John M. Louis, Wai-Ming Yau, and Robert Tycko https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/jacs.1c06339/20210810/images/medium/ja1c06339_0009.gif Journal of the American Chemical Society DOI: 10.1021/jacs.1c06339 http://feeds.feedburner.com/~r/acs/jacsat/~4/icEctWA9HQc
nmrlearner Journal club 0 08-11-2021 07:41 PM
[ASAP] Coupled In Situ NMR and EPR Studies Reveal the Electron Transfer Rate and Electrolyte Decomposition in Redox Flow Batteries
Coupled In Situ NMR and EPR Studies Reveal the Electron Transfer Rate and Electrolyte Decomposition in Redox Flow Batteries Evan Wenbo Zhao, Erlendur Jo?nsson, Rajesh B. Jethwa, Dominic Hey, Dongxun Lyu, Adam Brookfield, Peter A. A. Klusener, David Collison, and Clare P. Grey https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/jacs.0c10650/20210121/images/medium/ja0c10650_0008.gif Journal of the American Chemical Society DOI: 10.1021/jacs.0c10650 http://feeds.feedburner.com/~r/acs/jacsat/~4/AFpRBY2VIIc
nmrlearner Journal club 0 01-22-2021 10:13 AM
[ASAP] In vitro-Constructed Ribosomes Enable Multi-site Incorporation of Noncanonical Amino Acids into Proteins
In vitro-Constructed Ribosomes Enable Multi-site Incorporation of Noncanonical Amino Acids into Proteins https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.0c00829/20210111/images/medium/bi0c00829_0006.gif Biochemistry DOI: 10.1021/acs.biochem.0c00829 http://feeds.feedburner.com/~r/acs/bichaw/~4/ka6wq8GcKfY More...
nmrlearner Journal club 0 01-13-2021 08:38 AM
[ASAP] A Nuclear Resonance Vibrational Spectroscopic Study of Oxy Myoglobins Reconstituted with Chemically Modified Heme Cofactors: Insights into the Fe–O2 Bonding and Internal Dynamics of the Protein
A Nuclear Resonance Vibrational Spectroscopic Study of Oxy Myoglobins Reconstituted with Chemically Modified Heme Cofactors: Insights into the Fe–O2 Bonding and Internal Dynamics of the Protein https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00829/20181119/images/medium/bi-2018-00829h_0005.gif Biochemistry DOI: 10.1021/acs.biochem.8b00829 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/8rdOmUxjIuA More...
nmrlearner Journal club 0 11-25-2018 06:02 AM
[ASAP] X-ray Emission Spectroscopy as an in Situ Diagnostic Tool for X-ray Crystallography of Metalloproteins Using an X-ray Free-Electron Laser
X-ray Emission Spectroscopy as an in Situ Diagnostic Tool for X-ray Crystallography of Metalloproteins Using an X-ray Free-Electron Laser https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00325/20180628/images/medium/bi-2018-00325f_0007.gif Biochemistry DOI: 10.1021/acs.biochem.8b00325 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/h0rNnSSvyKY More...
nmrlearner Journal club 0 06-29-2018 08:31 AM
[NMR paper] Indirect use of deuterium in solution NMR studies of protein structure and hydrogen bonding.
Indirect use of deuterium in solution NMR studies of protein structure and hydrogen bonding. Related Articles Indirect use of deuterium in solution NMR studies of protein structure and hydrogen bonding. Prog Nucl Magn Reson Spectrosc. 2014 Feb;77:49-68 Authors: Tugarinov V Abstract A description of the utility of deuteration in protein NMR is provided with an emphasis on quantitative evaluation of the effects of deuteration on a number of NMR parameters of proteins: (1) chemical shifts, (2) scalar coupling constants, (3) relaxation...
nmrlearner Journal club 0 01-15-2014 05:16 PM
Indirect Use of Deuterium in Solution NMR Studies of Protein Structure and Hydrogen Bonding
Indirect Use of Deuterium in Solution NMR Studies of Protein Structure and Hydrogen Bonding Publication date: Available online 28 August 2013 Source:Progress in Nuclear Magnetic Resonance Spectroscopy</br> Author(s): Vitali Tugarinov</br> A description of the utility of deuteration in protein NMR is provided with an emphasis on quantitative evaluation of the effects of deuteration on a number of NMR parameters of proteins: (1) chemical shifts, (2) scalar coupling constants, (3) relaxation properties (R 1 and R 2 rates) of nuclei directly attached to one or more...
nmrlearner Journal club 0 08-29-2013 01:27 AM
Hydrogen-bonding potential to refine NMR structure
An Empirical Backbone-Backbone Hydrogen-Bonding Potential in Proteins and Its Applications to NMR Structure Refinement and Validation Alexander Grishaev and Ad Bax J. Am. Chem. Soc.; 2004; 126(23) pp 7281 - 7292 http://pubs.acs.org./isubscribe/journals/jacsat/126/i23/figures/ja0319994n00001.gif Abstract: A new multidimensional potential is described that encodes for the relative spatial arrangement of the peptidyl backbone units as observed within a large database of high-resolution X-ray structures. The detailed description afforded by such an analysis provides an opportunity to study...
nmrlearner Journal club 0 06-29-2005 04:16 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:36 AM.


Map