[ASAP] A Chiral 19F NMR Reporter of Foldamer Conformation in Bilayers

		BioNMR > Educational resources > Journal club
[ASAP] A Chiral 19F NMR Reporter of Foldamer Conformation in Bilayers

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-17-2022, 11:19 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

[ASAP] A Chiral 19F NMR Reporter of Foldamer Conformation in Bilayers

[ASAP] A Chiral 19F NMR Reporter of Foldamer Conformation in Bilayers

Siyuan Wang, Flavio della Sala, Matthew J. Cliff, George F. S. Whitehead, In?igo J. Vito?rica-Yreza?bal, and Simon J. Webb

Journal of the American Chemical Society
DOI: 10.1021/jacs.2c09103

Source: Journal of the American Chemical Society

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[ASAP] SARS-CoV-2 Envelope Protein Forms Clustered Pentamers in Lipid Bilayers SARS-CoV-2 Envelope Protein Forms Clustered Pentamers in Lipid Bilayers https://pubs.acs.org/cms/10.1021/acs.biochem.2c00464/asset/images/medium/bi2c00464_0008.gif Biochemistry DOI: 10.1021/acs.biochem.2c00464 More...	nmrlearner	Journal club	0	10-12-2022 07:46 AM
[ASAP] Magnetically Aligned Lipid Bilayers with High Cholesterol for Solid-State NMR of Membrane Proteins Magnetically Aligned Lipid Bilayers with High Cholesterol for Solid-State NMR of Membrane Proteins https://pubs.acs.org/cms/10.1021/acs.biochem.2c00262/asset/images/medium/bi2c00262_0010.gif Biochemistry DOI: 10.1021/acs.biochem.2c00262 More...	nmrlearner	Journal club	0	07-19-2022 05:10 PM
[ASAP] Comparative Analysis of the Conformation, Aggregation, Interaction, and Fibril Morphologies of Human a-, ß-, and ?-Synuclein Proteins Comparative Analysis of the Conformation, Aggregation, Interaction, and Fibril Morphologies of Human a-, ß-, and ?-Synuclein Proteins https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00343/20180612/images/medium/bi-2018-00343q_0010.gif Biochemistry DOI: 10.1021/acs.biochem.8b00343 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/TOjFPcISiQs More...	nmrlearner	Journal club	0	06-13-2018 05:09 PM
[ASAP] Gating Mechanism of Aquaporin Z in Synthetic Bilayers and Native Membranes Revealed by Solid-State NMR Spectroscopy Gating Mechanism of Aquaporin Z in Synthetic Bilayers and Native Membranes Revealed by Solid-State NMR Spectroscopy Yongxiang Zhao, Huayong Xie, Lili Wang, Yang Shen, Wei Chen, Benteng Song, Zhengfeng Zhang, Anmin Zheng, Qingsong Lin, Riqiang Fu, Jufang Wang, Jun Yang https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/jacs.8b03446/20180611/images/medium/ja-2018-03446h_0009.gif Journal of the American Chemical Society DOI: 10.1021/jacs.8b03446 http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA...	nmrlearner	Journal club	0	06-11-2018 07:38 PM
[ASAP] Watching Three-Dimensional Movements of Single Membrane Proteins in Lipid Bilayers Watching Three-Dimensional Movements of Single Membrane Proteins in Lipid Bilayers https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00253/20180412/images/medium/bi-2018-00253y_0005.gif Biochemistry DOI: 10.1021/acs.biochem.8b00253 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/0_6ur9PV8uU More...	nmrlearner	Journal club	0	04-13-2018 01:15 AM
[NMR paper] Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity. Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity. Related Articles Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity. J Mol Biol. 2018 Jan 09;: Authors: Lee M, Yao H, Kwon B, Waring AJ, Ruchala P,...	nmrlearner	Journal club	0	01-14-2018 05:13 PM
Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity Publication date: Available online 10 January 2018 Source:Journal of Molecular Biology</br> Author(s): Myungwoon Lee, Hongwei Yao, Byungsu Kwon, Alan J. Waring, Peter Ruchala, Chandan Singh, Mei Hong</br> Enveloped viruses enter cells by using their fusion proteins to merge the virus lipid envelope and the cell membrane. While...	nmrlearner	Journal club	0	01-10-2018 12:45 PM
[NMR paper] Chiral discrimination of ?-hydroxy acids and N-Ts-?-amino acids induced by tetraaza macrocyclic chiral solvating agents by using (1)H NMR spectroscopy. Chiral discrimination of ?-hydroxy acids and N-Ts-?-amino acids induced by tetraaza macrocyclic chiral solvating agents by using (1)H NMR spectroscopy. Related Articles Chiral discrimination of ?-hydroxy acids and N-Ts-?-amino acids induced by tetraaza macrocyclic chiral solvating agents by using (1)H NMR spectroscopy. Org Biomol Chem. 2017 Jan 27;: Authors: Lv C, Feng L, Zhao H, Wang G, Stavropoulos P, Ai L Abstract In the field of chiral recognition, reported chiral discrimination by (1)H NMR spectroscopy has mainly focused on...	nmrlearner	Journal club	0	01-28-2017 08:29 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off