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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


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Old 07-01-2009, 03:08 PM
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Default Ph.D. and postdoctoral positions in hyper-dimensional NMR : Frankfurt-am-Main Germany

Employer: Institute of Biophysical Chemistry
Website: http://www.bpc.uni-frankfurt....
Location: Frankfurt am Main, Germany
Posted: June 24, 2009
Expires: September 23, 200



The research group of Prof. Peter Güntert at the Institute of Biophysical Chemistry of the Goethe University Frankfurt am Main invites applications for Ph.D. and postdoctoral positions in Hyper-dimensional NMR spectroscopy for automated protein structure determination.

The positions are funded for three years by a research grant of the DFG (Deutsche Forschungsgemeinschaft). The research project involves the development of automated multidimensional NMR methodology and its application to structural studies of proteins. The positions are located in the Center for Biomolecular Magnetic Resonance (BMRZ) of the University of Frankfurt, which is equipped with 13 state-of-the-art NMR spectrometers (400-950 MHz) and excellent computing facilities incl. clusters and GRID.

The successful candidate must have a M.Sc. or equivalent or Ph.D. degree in a relevant field of science, excellent programming skills in higher programming languages, and experience in biomolecular NMR.

Please send your complete application, including CV, photo, list of publications, and the names and addresses of two references by email (links below) or post to:


Dr. Victor Zharavin
Institute of Biophysical Chemistry N201-0.05
Goethe University Frankfurt am Main
Max-von-Laue-Str. 9
60438 Frankfurt am Main
Germany
Phone: +49-69-79829367
Fax: +49-69-79829632


http://www.bpc.uni-frankfurt.de/guen...imensional_NMR

http://www.nature.com/naturejobs/sci...dimensional-NM

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