Ph.D. position in Biocomputational NMR

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Ph.D. position in Biocomputational NMR

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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08-19-2010, 02:44 AM

nmrlearner

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Ph.D. position in Biocomputational NMR

Ph.D. position in Biocomputational NMR

The research group of Prof. Peter Güntert invites applications for Ph.D. position in multi-dimensional NMR spectroscopy for automated protein structure determination.

The positions are funded for three years by a research grant of the DFG (Deutsche Forschungsgemeinschaft). The research project involves the development of automated computational NMR methods and its application to structural studies of proteins.

The facility is the Center for Biomolecular Magnetic Resonance (BMRZ), In…

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PhD in Biocomputational NMR PhD in Biocomputational NMR The research group of Prof. Peter Güntert invites applications for Ph.D. student position in multi-dimensional NMR spectroscopy for automated protein structure determination. The fellowship is funded for three years by a research grant of the DFG (Deutsche Forschungsgemeinschaft). The research project involves the development of automated computational NMR methods and its application to structural studies of proteins. The facility is the Center for Biomolecular Magnetic Resonance (BMRZ)… More...	nmrlearner	Job marketplace	0	08-30-2010 09:00 PM

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