Journal Highlight: Environmental NMR – the early years

		BioNMR > Educational resources > General
Journal Highlight: Environmental NMR – the early years

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-31-2015, 09:39 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,731

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Journal Highlight: Environmental NMR – the early years

Journal Highlight: Environmental NMR – the early years

A personal viewpoint of the development of environmental NMR spectroscopy is presented from its beginnings when it was applied to the analysis of soil humic acids.

Read the rest at Spectroscopynow.com

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Journal Highlight: Examination of amber and related materials by NMR spectroscopy Journal Highlight: Examination of amber and related materials by NMR spectroscopy http://www.spectroscopynow.com/common/images/thumbnails/14aaaa23abe.jpgThe solid-state 13C and solution 1H NMR spectra of fossilized resins (ambers) has generated five groupings of materials based on spectral characteristics. Read the rest at Spectroscopynow.com	nmrlearner	General	0	01-03-2015 12:53 PM
Journal Highlight: On the tuning of high-resolution NMR probes Journal Highlight: On the tuning of high-resolution NMR probes http://www.spectroscopynow.com/common/images/thumbnails/14a0562f4b6.jpgThree optimum conditions for the tuning of NMR probes are compared: the conventional tuning optimum, the spin noise tuning optimum and the newly introduced frequency shift tuning optimum. Read the rest at Spectroscopynow.com	nmrlearner	General	0	12-01-2014 12:17 PM
Journal Highlight: Aqueous and lipid nuclear magnetic resonance metabolomic profiles of the earthworm Aporrectodea caliginosa show potential as an indicator species for environmental metabolomics Journal Highlight: Aqueous and lipid nuclear magnetic resonance metabolomic profiles of the earthworm Aporrectodea caliginosa show potential as an indicator species for environmental metabolomics http://www.spectroscopynow.com/common/images/thumbnails/149809b1b4d.jpgThe aqueous and lipid metabolites in Aporrectodea caliginosa have been examined using high-resolution 1- and 2-dimensional nuclear magnetic resonance spectroscopy, allowing worms from different sites to be distinguished. Read the rest at Spectroscopynow.com	nmrlearner	General	0	11-06-2014 08:42 AM
Journal Highlight: Quantitative 2D liquid-state NMR Journal Highlight: Quantitative 2D liquid-state NMR http://www.spectroscopynow.com/common/images/thumbnails/1465cafc4c8.jpgThis review aims at presenting recent efforts to reach a high trueness and precision in quantitative measurements of liquids by 2D NMR. Read the rest at Spectroscopynow.com	nmrlearner	General	0	06-02-2014 10:02 PM
Journal Highlight: Hydrothermal upgrading of algae paste: Application of 31P-NMR Journal Highlight: Hydrothermal upgrading of algae paste: Application of 31P-NMR http://www.spectroscopynow.com/common/images/thumbnails/1421ee32c5b.jpgThe fate of derivatized (2-chloro-4,4,5,5-tetramethyl-1,3,2-dioxaphospholane) hydroxyl groups during hydrothermal upgrading of algae was studied by 31P NMR to understand the transformation of algal biomass into biocrude. Read the rest at Spectroscopynow.com	nmrlearner	General	0	11-04-2013 06:07 PM
Journal Highlight: 3He NMR: from free gas to its encapsulation in fullerene Journal Highlight: 3He NMR: from free gas to its encapsulation in fullerene http://www.spectroscopynow.com/common/images/thumbnails/1403959935b.jpgThe 3He nuclear magnetic shieldings were calculated for single helium atom, its dimer, simple models of fullerene cages (He@Cn), and single wall carbon nanotubes. Read the rest at Spectroscopynow.com	nmrlearner	General	0	08-05-2013 09:06 AM
Journal Highlight: How to tickle spins with a Fourier Transform NMR spectrometer Journal Highlight: How to tickle spins with a Fourier Transform NMR spectrometer http://www.spectroscopynow.com/common/images/thumbnails/13c920587a1.jpgSpin tickling can readily be achieved in homonuclear systems with Fourier transform NMR spectrometers by applying short pulses in the intervals between the sampling points. Read the rest at Spectroscopynow.com	nmrlearner	General	0	02-04-2013 08:00 PM
Agilent Technologies announces winner of fourth annual early career professor ... - Environmental Expert (press release) <img alt="" height="1" width="1" /> Agilent Technologies announces winner of fourth annual early career professor ... Environmental Expert (press release) Mittermaier joined the faculty in the department of chemistry at McGill in 2005 and has used nuclear magnetic resonance (NMR) spectroscopy in his research to develop an understanding of how the primary amino-acid sequence of a protein determines its ... Agilent Technologies announces winner of fourth annual early career professor ... - Environmental Expert (press release) More...	nmrlearner	Online News	0	05-11-2012 10:36 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off