Human herpes virus 4: No bar to understanding

		BioNMR > Educational resources > General
Human herpes virus 4: No bar to understanding

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

05-01-2014, 03:34 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Human herpes virus 4: No bar to understanding

Human herpes virus 4: No bar to understanding

NMR spectroscopy has been used to investigate how a viral protein in human herpes virus 4 (also known as Epstein-Barr) regulates the activity of a second essential protein and so reveals a possible new target for the development of antiviral drugs against this common infectious agent.

Read the rest at Spectroscopynow.com

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Researchers discover how the kissing disease virus hijacks human cells - EurekAlert (press release) <img alt="" height="1" width="1" /> Researchers discover how the kissing disease virus hijacks human cells EurekAlert (press release) Using cutting-edge nuclear magnetic resonance techniques at the University of Montreal facility for structural biology in the Department of Biochemistry and Molecular Medicine, the scientists studied how the EBNA2 protein of the EBV virus binds to one ... and more » Researchers discover how the kissing disease virus hijacks human cells - EurekAlert (press release) More...	nmrlearner	Online News	0	04-10-2014 02:25 PM
Spaghetti virus: NMR clues to cancer-causing herpes Spaghetti virus: NMR clues to cancer-causing herpes http://www.spectroscopynow.com/common/images/thumbnails/1446d6b1158.jpgNMR spectroscopy research carried out at Manchester University has revealed that herpes virus proteins are more "spaghetti-like" than previously thought. The discovery hints at possible treatments for a form of the disease that causes the cancer known as Kaposi’s sarcoma. Read the rest at Spectroscopynow.com	nmrlearner	General	0	03-01-2014 11:11 AM
â??Spaghetti-likeâ?? Arms of Herpes Virus Could Be a Therapeutic Target for Kaposi ... - BioNews Texas http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcSiu2NgImTGJSUOcJ9Hl5IZ9j2AT9G2pp1vhDQUF1bOe9cUrMH1qYvtJ84-egQxkMATRauhVdqc BioNews Texas <img alt="" height="1" width="1" /> â??Spaghetti-likeâ?? Arms of Herpes Virus Could Be a Therapeutic Target for Kaposi ... BioNews Texas The researchers examined how a monkey herpes virus binds with other large molecules, such as cellular proteins, in the host cell by using a technique called NMR (Nuclear Magnetic Resonance), which can visualize the structure of molecules at the ... â??Spaghetti-likeâ?? Arms of Herpes Virus Could Be a...	nmrlearner	Online News	0	02-19-2014 12:07 AM
Solid-State Nuclear MagneticResonance (NMR) Spectroscopyof Human Immunodeficiency Virus gp41 Protein That Includes the FusionPeptide: NMR Detection of Recombinant Fgp41 in Inclusion Bodies inWhole Bacterial Cells and Structural Characterization of Pu Solid-State Nuclear MagneticResonance (NMR) Spectroscopyof Human Immunodeficiency Virus gp41 Protein That Includes the FusionPeptide: NMR Detection of Recombinant Fgp41 in Inclusion Bodies inWhole Bacterial Cells and Structural Characterization of Purifiedand Membrane-Associated Fgp41 http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/bi201292e/aop/images/medium/bi-2011-01292e_0009.gif Biochemistry DOI: 10.1021/bi201292e http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/omcuPF0ineE ...	nmrlearner	Journal club	0	11-01-2011 01:52 AM
Herpes 3D: NMR reveals viral protein hijacking Herpes 3D: NMR reveals viral protein hijacking UK scientists have used NMR for the first time to develop a 3D picture of a herpes virus protein interacting with a key part of the human cellular machinery. The study improves our understanding of how the virus hijacks human cells and could eventually lead to new targets for drug therapy. Source: Spectroscopynow.com	nmrlearner	General	0	01-15-2011 02:09 AM
[NMR paper] Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy. Related Articles Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy. Eur J Biochem. 1998 Oct 1;257(1):69-77 Authors: Clish CB, Peyton DH, Barklis E The capsid domain of retroviral Gag proteins possesses a single highly conserved...	nmrlearner	Journal club	0	11-17-2010 11:15 PM
[NMR paper] Comparison of the solution conformations of a human immunodeficiency virus peptidomim Comparison of the solution conformations of a human immunodeficiency virus peptidomimetic and its retro-inverso isomer using 1H NMR spectroscopy. Related Articles Comparison of the solution conformations of a human immunodeficiency virus peptidomimetic and its retro-inverso isomer using 1H NMR spectroscopy. J Pept Res. 1997 Dec;50(6):421-35 Authors: Higgins KA, Bicknell W, Keah HH, Hearn MT The solution conformations of the all L-alpha-peptide 1 and the corresponding retro-all D-alpha-peptide 2, two 20-metric peptides which generate antibodies...	nmrlearner	Journal club	0	08-22-2010 05:08 PM
[NMR paper] NMR solution structure of the RNA-binding peptide from human immunodeficiency virus ( NMR solution structure of the RNA-binding peptide from human immunodeficiency virus (type 1) Rev. Related Articles NMR solution structure of the RNA-binding peptide from human immunodeficiency virus (type 1) Rev. Biochemistry. 1995 Jul 4;34(26):8242-9 Authors: Scanlon MJ, Fairlie DP, Craik DJ, Englebretsen DR, West ML NMR spectroscopy has been used to solve the three-dimensional solution structure of a minimal RNA-binding domain of the Rev protein from the human immunodeficiency virus (type 1), an essential regulatory protein for viral...	nmrlearner	Journal club	0	08-22-2010 03:50 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off