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NMR processing:
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MARS
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PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
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UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
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RPF scores
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Vasco
iCing
RDCs:
DC
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Pseudocontact shifts:
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Protein geomtery:
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PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
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MetaMQAPII
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STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
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V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
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Amber
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Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


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Old 05-23-2006, 09:39 AM
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Wheat Germ Cell-Free Protein Production Workshop


PDF file


The Center for Eukaryotic Structural Genomics (CESG) and the Nuclear Magnetic Resonance Facility at Madison
(NMRFAM) are pleased to announce the first Wheat Germ Cell-Free Protein Production Workshop to be held from
July 30 - August 4, 2006, at the Department of Biochemistry at the University of Wisconsin-Madison in Madison, Wisconsin,
USA. To register for this workshop, complete the Registration Form on the next page and mail in with your NONREFUNDABLE
payment of $500.00 (academic) or $750.00 (private industry) by May 15, 2006.

PURPOSE
The workshop will offer participants a unique opportunity to obtain hands-on experience with cell-free protein production
from wheat germ extracts. The week-long workshop will cover various aspects of small-scale expression screening (μg
quantities of attendee-nominated target protein) and large-scale production (mg quantities of target protein selected from
attendee efforts) of labeled proteins for NMR spectroscopy or crystallization screening. Both manual and automated
procedures will be covered.

SCOPE
Participants can try these approaches with their own targets. Necessary protocols will be sent to all participants just prior to
the workshop. All the data generated during the workshop by all of the participants as well as any relevant presentation and
seminar materials will be sent to all of the participants after the completion of the workshop. The workshop will be limited to
24 participants and geared toward scientists with at least 3-5 years of experience in protein production and purification. A
registration fee will be required to help defray reagent costs.

TRAVEL AND LODGING
Travel and lodging need be arranged by each participant. We have a block of rooms set aside that you can reserve for a
reduced rate ($89 for one person or $99 for two people per night) at the Best Western InnTowner (www.inntowner.com).
When you make your reservation, ask for a room in the "CESG block." NOTE: This block of rooms will only be available
until June 1, 2006. This hotel was chosen because it is very convenient to CESG and NMRFAM. They have a free shuttle
which will bring you right to the workshop location, or one can walk the distance in about 15 minutes.

REGISTRATION
Your registration fee of $500.00 (academic) or $750.00 (private industry) includes the workshop fees, dinner at the opening and
closing receptions, and continental breakfast, lunch buffets, and afternoon breaks every day. The preferred method for payment of
your registration fee is by credit card, but can also be made in U.S. funds, drawn on a U.S. bank, or by international money order
payable to "University of Wisconsin-Madison." Your registration fee is NON-REFUNDABLE, and the registration deadline for the
workshop is May 15, 2006. Participation in the workshop will be limited to a total of 24 participants, so we encourage those
who are interested to register early. Instructional materials (protocols, links to reference information, and data) will be sent
to participants in advance of the workshop. If you have any questions, send an e-mail to: cesginfo@biochem.wisc.edu.
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