Ccsb 2012 - BioNMR

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Ccsb 2012

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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02-06-2012, 03:50 AM

nmrlearner

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Ccsb 2012

CCSB 2012

We are pleased to announce the 2nd China Canada Systems Biology Conference and the 19th Methods in Protein Structure Analysis, which will take place at the Ottawa Convention Centre, Ottawa, Canada from June 25-28, 2012. The 2012 symposium is being organized and hosted by the Ottawa Institute of Systems Biology (University of Ottawa), The International Association for Protein Structure Analysis and Proteomics, and the China-Ontario BioAnalytic Consortium (COBAC).

The goal of this meeting is to bring together internationally recognized scientists and students in the field of systems biology, protein biochemistry, and proteomics to promote scientific discussion and the development of new collaborations.

Of special interest for NMR spectroscopists will be the session "Dynamic links between protein structure and function". Invited speakers to this session include Lewis Kay (University of Toronto), Katherine Henzler-Wildman (Washington University School of Medicine), Gianluigi Veglia (University of Minnesota), Kevin Gardner (University of Texas Southwestern) and Dorothee Kern (Brandeis).

More information can be found at http://www.oisb.ca/june_2012_symposium/ccsb_2012.htm

Registration is now open. Abstract submission deadline is May 15th, 2012.

Natalie Goto

Associate Professor

Department of Chemistry
University of Ottawa
Web: http://mysite.science.uottawa.ca/ngoto/Welcome.html

Read complete story on NMR900 blog

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